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L3_129_000G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_88_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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247..2175
DNA (1929bp) protein (643aa)
GTP-binding protein TypA n=3 Tax=Bifidobacterium dentium RepID=B1S7N0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27421.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
GTP-binding protein TypA
L3_129_000G1_scaffold_88_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2288..2761
DNA (474bp) protein (158aa)
Alcohol dehydrogenase, class IV n=4 Tax=Bifidobacterium dentium RepID=D2Q584_BIFDB
alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:ADB10099.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_129_000G1_scaffold_88_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2805..3806
DNA (1002bp) protein (334aa)
Prephenate dehydratase {ECO:0000313|EMBL:ETO96154.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ETO96154.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
pheA; pheA Prephenate dehydratase (EC:5.4.99.5)
PheA Prephenate dehydratase n=2 Tax=Bifidobacterium dentium RepID=D2Q583_BIFDB
L3_129_000G1_scaffold_88_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3800..4858
DNA (1059bp) protein (353aa)
tyrA2; prephenate dehydrogenase (EC:1.3.1.43)
TyrA2 Prephenate dehydrogenase {ECO:0000313|EMBL:ADB10097.1}; EC=1.3.1.43 {ECO:0000313|EMBL:ADB10097.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
TyrA2 Prephenate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2Q582_BIFDB
L3_129_000G1_scaffold_88_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4889..5146)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7N4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10096.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_129_000G1_scaffold_88_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5186..8032)
DNA (2847bp) protein (949aa)
Permease protein of ABC transporter system n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q580_BIFDB
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:ETO96211.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease
L3_129_000G1_scaffold_88_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8029..8847)
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41925.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EFM41925.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5K1_9BIFI
L3_129_000G1_scaffold_88_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8951..9871
DNA (921bp) protein (307aa)
Tyrosine recombinase XerC n=4 Tax=Bifidobacterium dentium RepID=D2Q578_BIFDB
integrase/recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_129_000G1_scaffold_88_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9994..11628
DNA (1635bp) protein (545aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7Z5_9BIFI
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ETO96343.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
oppA2; oligopeptide-binding protein OppA
L3_129_000G1_scaffold_88_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11863..13506
DNA (1644bp) protein (548aa)
OppA2 Oligopeptide-binding protein oppA n=4 Tax=Bifidobacterium dentium RepID=D2Q576_BIFDB
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ETO96220.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
oppA2; oligopeptide-binding protein OppA
L3_129_000G1_scaffold_88_11
unknown

Not on your lists

13554..13709
DNA (156bp) protein (52aa)

This feature has no annotations

L3_129_000G1_scaffold_88_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13831..14757
DNA (927bp) protein (309aa)
OppB2 Oligopeptide transport system permease protein oppB n=4 Tax=Bifidobacterium dentium RepID=D2Q575_BIFDB
oppB2; peptide ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EFM41929.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_129_000G1_scaffold_88_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14775..15743
DNA (969bp) protein (323aa)
OppC1 Oligopeptide transport system permease protein oppC n=2 Tax=Bifidobacterium dentium RepID=D2Q574_BIFDB
oppC1; peptide ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96202.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15764..17773
DNA (2010bp) protein (670aa)
OppD2 Oligopeptide transport ATP-binding protein oppD {ECO:0000313|EMBL:ADB10088.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ADB10088.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
oppD2; peptide ABC transporter ATP-binding protein (EC:3.6.3.30)
OppD2 Oligopeptide transport ATP-binding protein oppD n=4 Tax=Bifidobacterium dentium RepID=D2Q573_BIFDB
L3_129_000G1_scaffold_88_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18002..18862
DNA (861bp) protein (287aa)
xth; exodeoxyribonuclease III (EC:4.2.99.18)
Putative exodeoxyribonuclease III n=3 Tax=Bifidobacterium dentium RepID=B1S800_9BIFI
Putative exodeoxyribonuclease III {ECO:0000313|EMBL:ETO96185.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18960..19781
DNA (822bp) protein (274aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S801_9BIFI
hypothetical protein
PF12502 family protein {ECO:0000313|EMBL:ETO96224.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19804..20532
DNA (729bp) protein (243aa)
ABC-type Mn2+/Zn2+ transport systems, permease components n=2 Tax=Bifidobacterium dentium RepID=D2Q570_BIFDB
Mn2+/Zn2+ ABC transporter permease
ABC-type Mn2+/Zn2+ transport systems, permease components {ECO:0000313|EMBL:ADB10085.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_129_000G1_scaffold_88_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20532..21797
DNA (1266bp) protein (422aa)
tRNA (uracil-5-) -methyltransferase (EC:2.1.1.35)
tRNA (Uracil-5-)-methyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q569_BIFDB
TRAM domain protein {ECO:0000313|EMBL:ETO96320.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21794..22369
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5L2_9BIFI
Putative lipoprotein {ECO:0000313|EMBL:ETO96109.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter substrate-binding protein
L3_129_000G1_scaffold_88_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22471..24933
DNA (2463bp) protein (821aa)
ctpE; cation-transporting ATPase (EC:3.6.3.12)
E1-E2 ATPase n=2 Tax=Bifidobacterium dentium RepID=E1N9H6_9BIFI
E1-E2 ATPase {ECO:0000313|EMBL:ETO96324.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25005..27704
DNA (2700bp) protein (900aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
acn; acn aconitate hydratase (EC:4.2.1.3)
Acn Aconitate hydratase n=2 Tax=Bifidobacterium dentium RepID=D2QB65_BIFDB
L3_129_000G1_scaffold_88_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27812..29164)
DNA (1353bp) protein (451aa)
Na+ driven multidrug efflux pump n=2 Tax=Bifidobacterium dentium RepID=D2QB64_BIFDB
MATE efflux family protein {ECO:0000313|EMBL:ETO96340.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Na+ driven multidrug efflux pump
L3_129_000G1_scaffold_88_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29314..29964)
DNA (651bp) protein (217aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5L6_9BIFI
Maltose acetyltransferase {ECO:0000313|EMBL:ETO96135.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30112..31104
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=E0Q5L7_9BIFI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM41941.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraC family transcriptional regulator
L3_129_000G1_scaffold_88_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31184..32479)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5L8_9BIFI
ABC-2 family transporter protein {ECO:0000313|EMBL:ETO96157.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter
L3_129_000G1_scaffold_88_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32466..33722)
DNA (1257bp) protein (419aa)
ABC-type multidrug transport system permease n=2 Tax=Bifidobacterium dentium RepID=D2QB60_BIFDB
multidrug ABC transporter permease
ABC-2 family transporter protein {ECO:0000313|EMBL:ETO96179.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33739..34719)
DNA (981bp) protein (327aa)
ABC transporter ATP-binding protein (EC:3.6.3.30)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2QB59_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27365.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_129_000G1_scaffold_88_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34947..36086
DNA (1140bp) protein (380aa)
histidine kinase sensor of two-component system (EC:2.7.13.3)
Histidine kinase sensor of two-component system n=2 Tax=Bifidobacterium dentium RepID=D2QB58_BIFDB
Histidine kinase dimerization/phosphoacceptor domain protein {ECO:0000313|EMBL:ETO96152.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36083..36745
DNA (663bp) protein (221aa)
response regulatorof two-component system (EC:3.1.1.61)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5M3_9BIFI
Response regulator receiver domain protein {ECO:0000313|EMBL:ETO96327.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_129_000G1_scaffold_88_30
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36775..38883)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8F5_9BIFI
PF03235 family protein {ECO:0000313|EMBL:ETO96252.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
Displaying items 1-30 of 414 in total

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