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L3_129_000G1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_109_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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376..1935
DNA (1560bp) protein (520aa)
peptidase C69 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B65387
Peptidase C69 {ECO:0000313|EMBL:AIZ15661.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
peptidase C69
L3_129_000G1_scaffold_109_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1907..2584)
DNA (678bp) protein (226aa)
TetR family transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B576E2
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AIZ15662.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2642..3928
DNA (1287bp) protein (429aa)
cell division protein FtsY n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B512AC
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4106..5401
DNA (1296bp) protein (432aa)
ammonium transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6A0B7
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5403..5741
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3C022
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein N-II {ECO:0000313|EMBL:KFI78043.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
L3_129_000G1_scaffold_109_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5866..7722
DNA (1857bp) protein (619aa)
protein-P-II uridylyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B71748
protein-PII uridylyltransferase
Protein-PII uridylyltransferase {ECO:0000313|EMBL:AIZ15666.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7961..8542)
DNA (582bp) protein (194aa)
uracil-DNA glycosylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B461CE
uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:AIZ15667.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8578..9171)
DNA (594bp) protein (198aa)
uracil-DNA glycosylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B547BB
uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:AIZ15668.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9330..10679
DNA (1350bp) protein (450aa)
DNA helicase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B67F93
helicase DnaB
Helicase DnaB {ECO:0000313|EMBL:AIZ15669.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10681..12129
DNA (1449bp) protein (483aa)
glutamate ligase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7786E
glutamate ligase
Glutamate ligase {ECO:0000313|EMBL:AIZ15670.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12141..12890
DNA (750bp) protein (250aa)
glutamine amidotransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B52D96
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AIZ15671.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12970..13341
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5F3C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15672.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13473..15506
DNA (2034bp) protein (678aa)
protein kinase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3F8ED
protein kinase
Protein kinase {ECO:0000313|EMBL:AIZ15673.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15577..16644
DNA (1068bp) protein (356aa)
glycerophosphodiester phosphodiesterase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B363DD
glycerophosphodiester phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:AIZ15674.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16852..17505)
DNA (654bp) protein (218aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
uracil phosphoribosyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B30553
uracil phosphoribosyltransferase
L3_129_000G1_scaffold_109_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17752..18000
DNA (249bp) protein (83aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B60F34
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ15676.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18280..18534
DNA (255bp) protein (85aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6136E
General stress protein GlsB {ECO:0000313|EMBL:KFI78055.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
membrane protein
L3_129_000G1_scaffold_109_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19004..19942
DNA (939bp) protein (313aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B71AA8
dTDP-glucose 4,6-dehydratase
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AIZ15678.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20108..20827)
DNA (720bp) protein (240aa)
thymidine phosphorylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4B2D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15685.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20853..21908)
DNA (1056bp) protein (352aa)
DNA mismatch repair protein MutT n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B34BF0
DNA mismatch repair protein MutT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AIZ15686.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22003..24240)
DNA (2238bp) protein (746aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
polyphosphate kinase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B40370
L3_129_000G1_scaffold_109_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25487..26530
DNA (1044bp) protein (348aa)
septum formation initiator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7153F
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:AIZ15688.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26550..27764
DNA (1215bp) protein (405aa)
pilus biosynthesis protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7A5E7
Pilus biosynthesis protein {ECO:0000313|EMBL:KFI80421.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
pilus assembly protein
L3_129_000G1_scaffold_109_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27761..28510
DNA (750bp) protein (250aa)
pilus biosynthesis protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B2E294
Type II secretion system protein {ECO:0000313|EMBL:KFI80420.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
pilus assembly protein
L3_129_000G1_scaffold_109_25
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28465..29100
DNA (636bp) protein (212aa)
type II secretion system protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6CBF0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15691.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29243..29527
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B55759
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15692.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_109_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29530..29931
DNA (402bp) protein (134aa)
pilus assembly protein TadE n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B53A8D
Uncharacterized protein {ECO:0000313|EMBL:KFI80417.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
pilus assembly protein TadE
L3_129_000G1_scaffold_109_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29918..30421
DNA (504bp) protein (168aa)
pilus biosynthesis protein TadE n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B795DE
Pilus biosynthesis protein TadE {ECO:0000313|EMBL:KFI80416.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
pilus assembly protein TadE
L3_129_000G1_scaffold_109_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30467..32764
DNA (2298bp) protein (766aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:AIZ15695.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AIZ15695.1};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
DNA polymerase III subunit gamma/tau n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4BBA7
L3_129_000G1_scaffold_109_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32800..33402
DNA (603bp) protein (201aa)
recombinase RecR n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6E40B
recombinase RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Displaying items 1-30 of 118 in total

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