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L3_129_000G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_154_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDO57452.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDO57452.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Antioxidant, AhpC/TSA family n=1 Tax=Clostridium sp. L2-50 RepID=A7VG26_9CLOT
peroxiredoxin (alkyl hydroperoxide reductase subunit C)
L3_129_000G1_scaffold_154_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113..394)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYL9_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98116.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_129_000G1_scaffold_154_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(658..2628)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11347.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type multidrug transport system, ATPase and permease components
L3_129_000G1_scaffold_154_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2628..4370)
DNA (1743bp) protein (581aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGZ8_9FIRM
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDF11348.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type multidrug transport system, ATPase and permease components
L3_129_000G1_scaffold_154_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4644..5555
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11349.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
LysR family transcriptional regulator
L3_129_000G1_scaffold_154_6
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5693..6169)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KES6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB68506.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L3_129_000G1_scaffold_154_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6276..10730)
DNA (4455bp) protein (1485aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA polymerase III polC-type n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFK5_9FIRM
DNA polymerase III subunit alpha
L3_129_000G1_scaffold_154_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10767..11822)
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH02_9FIRM
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L3_129_000G1_scaffold_154_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11842..13326)
DNA (1485bp) protein (495aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF34_9FIRM
hypothetical protein
L3_129_000G1_scaffold_154_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13317..14483)
DNA (1167bp) protein (389aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGW3_9FIRM
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L3_129_000G1_scaffold_154_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14520..15332)
DNA (813bp) protein (271aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Phosphatidate cytidylyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND27_9FIRM
phosphatidate cytidylyltransferase
L3_129_000G1_scaffold_154_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15336..16070)
DNA (735bp) protein (245aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Isoprenyl transferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFL4_9FIRM
UDP pyrophosphate synthetase
L3_129_000G1_scaffold_154_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16272..16823)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFL9_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
frr; ribosome recycling factor
L3_129_000G1_scaffold_154_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16886..17593)
DNA (708bp) protein (236aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Uridylate kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGX3_9FIRM
uridylate kinase
L3_129_000G1_scaffold_154_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17694..18632)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11368.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..20503)
DNA (1698bp) protein (566aa)
Putative sensory transducer protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND36_9FIRM
Putative sensory transducer protein {ECO:0000313|EMBL:CDF11369.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Methyl-accepting chemotaxis protein
L3_129_000G1_scaffold_154_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21014..22099)
DNA (1086bp) protein (362aa)
Elongation factor Ts n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF44_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
elongation factor EF-Ts
L3_129_000G1_scaffold_154_18
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22203..22931)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KBL8_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
rpsB; 30S ribosomal protein S2
L3_129_000G1_scaffold_154_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23147..23707)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11372.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23806..24444)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11373.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24441..24755)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11374.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24792..26399)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11376.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26453..27211)
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH22_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
phosphatidylserine decarboxylase
L3_129_000G1_scaffold_154_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27247..27561)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11380.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_000G1_scaffold_154_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27566..28057)
DNA (492bp) protein (164aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFM9_9FIRM
chemotaxis protein CheD
L3_129_000G1_scaffold_154_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28085..28714)
DNA (630bp) protein (210aa)
Chemotaxis protein CheC n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGY9_9FIRM
Chemotaxis protein CheC {ECO:0000313|EMBL:CDF11382.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
chemotaxis protein CheC
L3_129_000G1_scaffold_154_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28744..29217)
DNA (474bp) protein (158aa)
Purine-binding chemotaxis protein CheW n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH25_9FIRM
Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CDF11383.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
purine-binding chemotaxis protein CheW
L3_129_000G1_scaffold_154_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29233..31320)
DNA (2088bp) protein (696aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Two-component system chemotaxis family sensor kinase CheA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND49_9FIRM
chemotaxis protein CheA
L3_129_000G1_scaffold_154_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31322..32512)
DNA (1191bp) protein (397aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF54_9FIRM
hypothetical protein
L3_129_000G1_scaffold_154_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32505..33245)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11386.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
Displaying items 1-30 of 141 in total

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