ggKbase home page

L3_129_000G1_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_173_1
unknown

Not on your lists

2..145
DNA (144bp) protein (48aa)

This feature has no annotations

L3_129_000G1_scaffold_173_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

475..1335
DNA (861bp) protein (287aa)
Cof-like hydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHU9_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EKY27548.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hydrolase, Cof family
L3_129_000G1_scaffold_173_3
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2146..3972
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
glmS2; glutamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMG6_9CLOT
L3_129_000G1_scaffold_173_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4080..5429
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3B1_9CLOT
L3_129_000G1_scaffold_173_5
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5552..5827
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74696.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
putative Cytosolic Protein
L3_129_000G1_scaffold_173_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6067..8181
DNA (2115bp) protein (705aa)
Transcription antiterminator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG72_9CLOT
Transcription antiterminator {ECO:0000313|EMBL:EOR28025.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative transcription antiterminator
L3_129_000G1_scaffold_173_7
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8184..10022
DNA (1839bp) protein (613aa)
PTS system mannitol-specific IIABC component n=1 Tax=Clostridium sp. CAG:265 RepID=R6KU49_9CLOT
PTS system mannitol-specific IIABC component {ECO:0000313|EMBL:CDB74694.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
PTS system, mannitol-specific IIC subunit
L3_129_000G1_scaffold_173_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10038..11033
DNA (996bp) protein (332aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBV6_9CLOT
mtlD; mannitol-1-phosphate 5-dehydrogenase
L3_129_000G1_scaffold_173_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11033..12193
DNA (1161bp) protein (387aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KHM9_9CLOT
mannitol dehydrogenase domain-containing protein
L3_129_000G1_scaffold_173_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12369..14225
DNA (1857bp) protein (619aa)
PTS system mannitol-specific IIABC component n=1 Tax=Clostridium sp. CAG:265 RepID=R6KU49_9CLOT
PTS system mannitol-specific IIABC component {ECO:0000313|EMBL:CDB74694.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
PTS system mannitol-specific transporter subunit IIC
L3_129_000G1_scaffold_173_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14329..15768
DNA (1440bp) protein (480aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJZ87306.1}; EC=3.2.1.86 {ECO:0000313|EMBL:KJZ87306.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.21)
Glycoside hydrolase n=2 Tax=Clostridium butyricum RepID=M8JLZ8_CLOBU
L3_129_000G1_scaffold_173_12
unknown

Not on your lists

comp(15833..15925)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_129_000G1_scaffold_173_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16010..16789)
DNA (780bp) protein (260aa)
Metal cation transporter, ZIP family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHQ8_9CLOT
Metal cation transporter, ZIP family {ECO:0000313|EMBL:EKY27549.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
zinc transporter ZupT
L3_129_000G1_scaffold_173_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16909..17592
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27550.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_000G1_scaffold_173_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17650..18357
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27551.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_000G1_scaffold_173_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18548..19882
DNA (1335bp) protein (445aa)
coenzyme A disulfide reductase (EC:1.6.99.3)
Putative CoA-disulfide reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIZ2_9CLOT
Putative CoA-disulfide reductase {ECO:0000313|EMBL:EKY27552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_173_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20185..21687
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHV2_9CLOT
UPF0371 protein HMPREF0216_01363 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_000G1_scaffold_173_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21879..23033
DNA (1155bp) protein (385aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHR2_9CLOT
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EKY27554.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_000G1_scaffold_173_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23335..24996
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27555.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RNA-metabolising metallo-beta-lactamase
L3_129_000G1_scaffold_173_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25093..25914
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27556.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_173_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26162..26839
DNA (678bp) protein (226aa)
sulfite reductase, assimilatory-type (EC:1.8.-.-)
Putative sulfite reductase, assimilatory-type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL85_9CLOT
Putative sulfite reductase, assimilatory-type {ECO:0000313|EMBL:EKY28706.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_173_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27093..28532
DNA (1440bp) protein (480aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLW4_9CLOT
L3_129_000G1_scaffold_173_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28749..29138
DNA (390bp) protein (130aa)
agaR1; alpha-galactosidase 1 (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28152.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_173_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29261..29947
DNA (687bp) protein (229aa)
UPI0003D67659 related cluster n=1 Tax=unknown RepID=UPI0003D67659
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ETI95756.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
HAD family hydrolase
L3_129_000G1_scaffold_173_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29970..30707
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98460.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_129_000G1_scaffold_173_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30809..31480)
DNA (672bp) protein (224aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL31_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY28704.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator, AraC family
L3_129_000G1_scaffold_173_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31610..33334
DNA (1725bp) protein (575aa)
Neopullulanase {ECO:0000313|EMBL:EEP55113.1}; EC=3.2.1.135 {ECO:0000313|EMBL:EEP55113.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=2 Tax=Clostridium butyricum RepID=B1R037_CLOBU
L3_129_000G1_scaffold_173_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33531..34751
DNA (1221bp) protein (407aa)
ROK family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL47_9CLOT
ROK family protein {ECO:0000313|EMBL:EKY28703.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator/sugar kinase
L3_129_000G1_scaffold_173_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34824..36347
DNA (1524bp) protein (508aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMA3_9CLOT
L3_129_000G1_scaffold_173_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36410..37576
DNA (1167bp) protein (389aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL80_9CLOT
Displaying items 1-30 of 96 in total

View Taxonomy