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L3_129_000G1_scaffold_895

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Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_895_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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132..806
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=7 Tax=Bacteroides RepID=A6L5U7_BACV8
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS01692.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_895_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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826..3138
DNA (2313bp) protein (771aa)
ABC transporter, permease protein n=3 Tax=root RepID=A6L5U6_BACV8
FtsX-like permease family protein {ECO:0000313|EMBL:KDS31433.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
ABC transporter permease
L3_129_000G1_scaffold_895_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3199..3636)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5U5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41059.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_129_000G1_scaffold_895_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3913..5769)
DNA (1857bp) protein (619aa)
Glutamine amidotransferase, class II/dipeptidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5U4_BACV8
glutamine amidotransferase, class II/dipeptidase
Glutamine amidotransferase class-I family protein {ECO:0000313|EMBL:KDS31431.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_895_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5902..8673)
DNA (2772bp) protein (924aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=2 Tax=Bacteroides RepID=R7P0U7_9BACE
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDF17888.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_129_000G1_scaffold_895_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8827..10248
DNA (1422bp) protein (474aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Bacteroides RepID=I9IMZ6_BACVU
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOS01716.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA methyltransferase
L3_129_000G1_scaffold_895_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10293..11219
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Pseudouridine synthase, RluA family n=4 Tax=Bacteroides RepID=C6Z2F2_9BACE
RNA pseudouridylate synthase
L3_129_000G1_scaffold_895_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11610..11780)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W1W2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24039.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_129_000G1_scaffold_895_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12338..14458)
DNA (2121bp) protein (707aa)
Prolyl oligopeptidase family protein n=3 Tax=root RepID=A6L5L7_BACV8
prolyl oligopeptidase
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:KDS47762.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_129_000G1_scaffold_895_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14685..16550)
DNA (1866bp) protein (622aa)
Membrane protein insertase YidC n=7 Tax=root RepID=YIDC_BACV8
inner membrane protein translocase component YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_129_000G1_scaffold_895_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16590..18188)
DNA (1599bp) protein (533aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
CTP synthase n=7 Tax=Bacteroides RepID=A6L5L5_BACV8
L3_129_000G1_scaffold_895_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18350..19792
DNA (1443bp) protein (481aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3RAZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS31290.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_129_000G1_scaffold_895_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19893..20981)
DNA (1089bp) protein (363aa)
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5L3_BACV8
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase family protein {ECO:0000313|EMBL:KDS31289.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_895_14
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21065..21679
DNA (615bp) protein (205aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L5L2_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEO61691.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_129_000G1_scaffold_895_15

Not on your lists

21838..22341
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=14 Tax=root RepID=C3Q293_9BACE
RNA polymerase sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EKC50010.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_129_000G1_scaffold_895_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22531..24306
DNA (1776bp) protein (592aa)
Pyruvate carboxylase subunit B n=5 Tax=Bacteroides RepID=A6L5K8_BACV8
pyruvate carboxylase subunit B
HMGL-like protein {ECO:0000313|EMBL:CDF17878.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_129_000G1_scaffold_895_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24432..25316
DNA (885bp) protein (295aa)
Xylanase n=6 Tax=Bacteroides RepID=E5URK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS47771.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
xylanase
L3_129_000G1_scaffold_895_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25288..26010)
DNA (723bp) protein (241aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=6 Tax=Bacteroides RepID=A6L5K6_BACV8
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L3_129_000G1_scaffold_895_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26139..26858)
DNA (720bp) protein (240aa)
Outer membrane protein, OmpA family n=12 Tax=Bacteroides RepID=A6L5K5_BACV8
membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24814.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_129_000G1_scaffold_895_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26907..28250)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5K4_BACV8
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EIY74822.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_129_000G1_scaffold_895_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28546..29673)
DNA (1128bp) protein (376aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Serine hydroxymethyltransferase n=7 Tax=Bacteroides RepID=GLYA_BACV8
L3_129_000G1_scaffold_895_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29920..30639)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5K2_BACV8
hypothetical protein
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS31280.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_895_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30649..31236)
DNA (588bp) protein (196aa)
Flavoredoxin n=6 Tax=Bacteroides RepID=A6L5K1_BACV8
flavoredoxin
Flavin reductase like domain protein {ECO:0000313|EMBL:KDS31279.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_895_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31242..31709)
DNA (468bp) protein (156aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=7 Tax=Bacteroides RepID=PYRI_BACV8
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_895_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31718..32659)
DNA (942bp) protein (314aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Aspartate carbamoyltransferase n=6 Tax=Bacteroides RepID=PYRB_BACV8
L3_129_000G1_scaffold_895_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32820..35147
DNA (2328bp) protein (776aa)
Glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase n=6 Tax=Bacteroides RepID=A6L5J8_BACV8
Penicillin-binding protein 1A {ECO:0000313|EMBL:EOS01736.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycosyl transferase family protein
L3_129_000G1_scaffold_895_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35354..36181
DNA (828bp) protein (276aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5J7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET15080.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_129_000G1_scaffold_895_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36256..37179)
DNA (924bp) protein (308aa)
Transcriptional regulator n=3 Tax=Bacteroides vulgatus RepID=A6L5J6_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS01738.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_895_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37331..37987)
DNA (657bp) protein (219aa)
translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Probable transaldolase n=6 Tax=Bacteroides RepID=TAL_BACV8
L3_129_000G1_scaffold_895_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38084..39058)
DNA (975bp) protein (325aa)
ABC-2 type transporter n=2 Tax=Bacteroides vulgatus RepID=D4V7H6_BACVU
ABC transporter permease
ABC-2 type transporter family protein {ECO:0000313|EMBL:KDS31212.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Displaying items 1-30 of 98 in total

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