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L3_129_000G1_scaffold_904

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_904_1
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..255)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLL7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49334.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_129_000G1_scaffold_904_2
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(252..887)
DNA (636bp) protein (212aa)
Uncharacterized protein (Fragment) n=1 Tax=Treponema phagedenis F0421 RepID=E7NRM4_TREPH
Uncharacterized protein {ECO:0000313|EMBL:EFW38785.1}; Flags: Fragment;; TaxID=754027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis F0421.;"
hypothetical protein
L3_129_000G1_scaffold_904_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1105..1320)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BQN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80459.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_129_000G1_scaffold_904_4
unknown

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comp(1298..1516)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_129_000G1_scaffold_904_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1569..1793)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM41696.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_129_000G1_scaffold_904_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1781..1912)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM41695.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_129_000G1_scaffold_904_7
unknown

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comp(1909..2112)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_129_000G1_scaffold_904_8
unknown

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2220..2423
DNA (204bp) protein (68aa)

This feature has no annotations

L3_129_000G1_scaffold_904_9
unknown

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2380..2871
DNA (492bp) protein (164aa)

This feature has no annotations

L3_129_000G1_scaffold_904_10
unknown

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2898..3551
DNA (654bp) protein (218aa)

This feature has no annotations

L3_129_000G1_scaffold_904_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3512..3712)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BS61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80994.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_129_000G1_scaffold_904_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4255..4566
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R3K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63099.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_129_000G1_scaffold_904_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4556..4990
DNA (435bp) protein (145aa)
Toxin-antitoxin system, toxin component domain protein n=2 Tax=Oscillibacter RepID=U2R3F8_9FIRM
Toxin-antitoxin system, toxin component domain protein {ECO:0000313|EMBL:ERK63044.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein predicted by Glimmer/Critica
L3_129_000G1_scaffold_904_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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5039..5626
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29245.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_129_000G1_scaffold_904_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5682..5939
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80055.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_129_000G1_scaffold_904_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6102..7244
DNA (1143bp) protein (381aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BUJ5_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI81854.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
integrase family protein
L3_129_000G1_scaffold_904_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7594..7821)
DNA (228bp) protein (76aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55927.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_129_000G1_scaffold_904_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8488..8718
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YL97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32962.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_129_000G1_scaffold_904_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8699..9028
DNA (330bp) protein (110aa)
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Clostridiales RepID=H1CEM1_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO32961.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_129_000G1_scaffold_904_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9063..10517
DNA (1455bp) protein (485aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BN10_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ERI73610.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
RNA polymerase sigma-54 factor
L3_129_000G1_scaffold_904_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10521..11180
DNA (660bp) protein (220aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
HAD hydrolase, family IA n=3 Tax=Clostridiales RepID=H1CEL9_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EHO32959.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_129_000G1_scaffold_904_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11384..12259
DNA (876bp) protein (292aa)
Phosphate binding protein n=2 Tax=Clostridiales RepID=G9YQS8_9FIRM
Phosphate binding protein {ECO:0000313|EMBL:EHO32958.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_129_000G1_scaffold_904_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12345..13211
DNA (867bp) protein (289aa)
Phosphate ABC transporter, permease protein PstC n=3 Tax=Clostridiales RepID=G9YQS7_9FIRM
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EHO32957.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pstC; phosphate ABC transporter permease protein
L3_129_000G1_scaffold_904_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13221..14087
DNA (867bp) protein (289aa)
Phosphate ABC transporter, permease protein PstA n=2 Tax=Clostridiales RepID=G9YQS6_9FIRM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ERI75447.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pstA; phosphate ABC transporter permease protein
L3_129_000G1_scaffold_904_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14100..14861
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pstB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YQS5_9FIRM
L3_129_000G1_scaffold_904_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14874..15518
DNA (645bp) protein (215aa)
Phosphate-specific transport system accessory protein PhoU n=3 Tax=Clostridiales RepID=G9YQS4_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_129_000G1_scaffold_904_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15531..16199
DNA (669bp) protein (223aa)
Putative transcriptional regulatory protein CseB n=3 Tax=Clostridiales RepID=G9YQS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32953.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_129_000G1_scaffold_904_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16448..18184
DNA (1737bp) protein (579aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phoR; Two-component system sensor histidine kinase PhoR (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEL2_9FIRM
L3_129_000G1_scaffold_904_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18204..18383)
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32951.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_129_000G1_scaffold_904_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18487..18654
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32950.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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