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L3_129_000G1_scaffold_1360

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1360_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(68..1054)
DNA (987bp) protein (329aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z5S5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17094.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_129_000G1_scaffold_1360_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1275..2201)
DNA (927bp) protein (309aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=D4V3W3_BACVU
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:EFV67490.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_129_000G1_scaffold_1360_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2428..3678
DNA (1251bp) protein (417aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphoglycerate kinase n=7 Tax=Bacteroides RepID=A6L2F3_BACV8
L3_129_000G1_scaffold_1360_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3753..4967)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9J6I0_BACVU
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82104.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_129_000G1_scaffold_1360_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5102..5932)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2F5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39869.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_129_000G1_scaffold_1360_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6166..8589)
DNA (2424bp) protein (808aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NUJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17099.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
beta-N-acetylhexosaminidase
L3_129_000G1_scaffold_1360_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8790..9881
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z5T1_9BACE
Transmembrane protein {ECO:0000313|EMBL:EFV67464.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transmembrane protein
L3_129_000G1_scaffold_1360_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9906..10466
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroides RepID=C6Z5T2_9BACE
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY82100.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_129_000G1_scaffold_1360_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10525..11886)
DNA (1362bp) protein (454aa)
Outer membrane protein transport protein (OMPP1/FadL/TodX) n=2 Tax=Bacteroides vulgatus RepID=D4V3X0_BACVU
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS29824.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
outer membrane protein
L3_129_000G1_scaffold_1360_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12227..13549
DNA (1323bp) protein (441aa)
MATE efflux family protein n=4 Tax=Bacteroides RepID=D4V3X1_BACVU
antiporter membrane protein
MATE efflux family protein {ECO:0000313|EMBL:KDS55801.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_129_000G1_scaffold_1360_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13648..14970
DNA (1323bp) protein (441aa)
Signal recognition particle protein n=7 Tax=Bacteroides RepID=A6L2G1_BACV8
signal recognition protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_1360_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15084..15965
DNA (882bp) protein (294aa)
Bifunctional protein FolD n=7 Tax=Bacteroides RepID=FOLD_BACV8
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_1360_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16904..17977
DNA (1074bp) protein (358aa)
Capsule biosynthesis protein n=2 Tax=Bacteroides vulgatus RepID=A6L2G3_BACV8
capsule biosynthesis protein
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) {ECO:0000313|EMBL:EOS06205.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_1360_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18205..18771
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6L2G4_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17107.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_129_000G1_scaffold_1360_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18844..19923
DNA (1080bp) protein (360aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides vulgatus RepID=D4V3X6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS06207.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
anti-sigma factor
L3_129_000G1_scaffold_1360_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19981..23475
DNA (3495bp) protein (1165aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UII2_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY82083.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
membrane protein
L3_129_000G1_scaffold_1360_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23494..24885
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3Z8_BACVU
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS55792.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_129_000G1_scaffold_1360_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24897..26273
DNA (1377bp) protein (459aa)
Redoxin family protein n=3 Tax=Bacteroides RepID=C6Z5F0_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:KDS55791.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
thiol-disulfide oxidoreductase
L3_129_000G1_scaffold_1360_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26281..27459
DNA (1179bp) protein (393aa)
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides vulgatus RepID=D4V3Y0_BACVU
thiol-disulfide oxidoreductase
AhpC/TSA family protein {ECO:0000313|EMBL:KDS29814.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_1360_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28076..29890
DNA (1815bp) protein (605aa)
Glycoside hydrolase family 2, candidate beta-glycosidase n=2 Tax=Bacteroides vulgatus RepID=A6L2H0_BACV8
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG19478.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-glycosidase
L3_129_000G1_scaffold_1360_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29896..31029
DNA (1134bp) protein (378aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aldose 1-epimerase n=2 Tax=Bacteroides vulgatus RepID=A6L2H1_BACV8
aldose 1-epimerase
L3_129_000G1_scaffold_1360_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31212..32783
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3Z4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82077.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
histidine kinase
Displaying 22 items

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