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L3_129_000G1_scaffold_1967

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1967_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(428..1420)
DNA (993bp) protein (331aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bacteroides RepID=D4VAV1_BACVU
Putative oxidoreductase {ECO:0000313|EMBL:KDS53441.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
ion-channel protein, oxidoreductase
L3_129_000G1_scaffold_1967_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1444..2784)
DNA (1341bp) protein (447aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Bacteroides RepID=E5UPH5_9BACE
L3_129_000G1_scaffold_1967_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2799..3203)
DNA (405bp) protein (135aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYP0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98662.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_1967_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3301..3939)
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Orotate phosphoribosyltransferase n=7 Tax=Bacteroides RepID=PYRE_BACV8
L3_129_000G1_scaffold_1967_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4039..4734)
DNA (696bp) protein (232aa)
ComF family protein n=3 Tax=Bacteroides RepID=D4VAU7_BACVU
Amidophosphoribosyl-transferase {ECO:0000313|EMBL:EFV68898.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
amidophosphoribosyl-transferase
L3_129_000G1_scaffold_1967_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4715..5200)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZU10_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78602.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
regulatory protein
L3_129_000G1_scaffold_1967_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5202..6038)
DNA (837bp) protein (279aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Release factor glutamine methyltransferase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U8G4_BACVU
protoporphyrinogen oxidase
L3_129_000G1_scaffold_1967_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6083..7135
DNA (1053bp) protein (351aa)
Riboflavin biosynthesis protein RibD n=5 Tax=root RepID=D4VAU4_BACVU
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
riboflavin biosynthesis protein ribD
L3_129_000G1_scaffold_1967_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7263..8660
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A6KYP6_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS53433.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_129_000G1_scaffold_1967_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8694..9425
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Isoprenyl transferase n=8 Tax=root RepID=A6KYP7_BACV8
UDP pyrophosphate synthase
L3_129_000G1_scaffold_1967_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9437..12079
DNA (2643bp) protein (881aa)
Outer membrane protein assembly complex, YaeT protein n=2 Tax=Bacteroides RepID=D4VAU1_BACVU
Outer membrane assembly complex, YaeT protein {ECO:0000313|EMBL:KDS53431.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
membrane protein
L3_129_000G1_scaffold_1967_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12100..12615
DNA (516bp) protein (172aa)
Cationic outer membrane protein n=2 Tax=Bacteroides vulgatus RepID=A6KYQ0_BACV8
cationic outer membrane protein
Cationic outer membrane protein {ECO:0000313|EMBL:ABR38564.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_129_000G1_scaffold_1967_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12673..13176
DNA (504bp) protein (168aa)
Outer membrane protein n=7 Tax=Bacteroides RepID=C6Z0E3_9BACE
outer membrane protein OmpH
Outer membrane family protein {ECO:0000313|EMBL:KDS27947.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_1967_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13252..14124
DNA (873bp) protein (291aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glutamate racemase n=3 Tax=Bacteroides RepID=C3RA01_9BACE
glutamate racemase
L3_129_000G1_scaffold_1967_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14181..15053
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U989_BACVU
L3_129_000G1_scaffold_1967_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15440..16678)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZU01_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78592.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_129_000G1_scaffold_1967_17
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16688..17023)
DNA (336bp) protein (112aa)
Ribosome-binding factor A n=15 Tax=root RepID=A6KYQ5_BACV8
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000313|EMBL:EEO59985.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_129_000G1_scaffold_1967_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17097..17735)
DNA (639bp) protein (213aa)
O-methyltransferase n=6 Tax=Bacteroides RepID=A6KYQ6_BACV8
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EFV68885.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_129_000G1_scaffold_1967_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17751..19214)
DNA (1464bp) protein (488aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyruvate kinase n=14 Tax=Bacteroides RepID=A6KYQ7_BACV8
L3_129_000G1_scaffold_1967_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19247..19669)
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
3-dehydroquinate dehydratase n=4 Tax=Bacteroides RepID=C6Z0D6_9BACE
3-dehydroquinate dehydratase
L3_129_000G1_scaffold_1967_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19736..20677
DNA (942bp) protein (314aa)
Tyrosine recombinase XerC n=7 Tax=Bacteroides RepID=A6KYQ9_BACV8
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_1967_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20819..22495
DNA (1677bp) protein (559aa)
Tetratricopeptide repeat protein n=5 Tax=Bacteroides RepID=C6Z0D4_9BACE
plasminogen binding protein
Putative plasminogen binding protein {ECO:0000313|EMBL:ABR38574.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_129_000G1_scaffold_1967_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22649..23329
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0D3_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:KDS53419.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_129_000G1_scaffold_1967_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23407..23670
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0D3_9BACE
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:CDF19865.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_129_000G1_scaffold_1967_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23675..24643
DNA (969bp) protein (323aa)
Magnesium chelatase subunit ChlI n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4C3_9BACE
Magnesium chelatase subunit ChlI {ECO:0000313|EMBL:CDF19866.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
magnesium chelatase subunit ChlI
L3_129_000G1_scaffold_1967_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24741..25331)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JW66_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS71039.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_129_000G1_scaffold_1967_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25379..25678)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JW65_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ76402.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_129_000G1_scaffold_1967_28
unknown

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comp(25950..26051)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_129_000G1_scaffold_1967_29
unknown

Not on your lists

comp(26218..26427)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_129_000G1_scaffold_1967_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26434..26616
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D1JW64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ76403.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
Displaying items 1-30 of 85 in total

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