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L3_129_000G1_scaffold_6344

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_6344_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(127..1083)
DNA (957bp) protein (319aa)
Acetyltransferase, GNAT family n=3 Tax=Bacteroides RepID=C6Z0I5_9BACE
Acetyltransferase family protein {ECO:0000313|EMBL:KDS27903.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
acetyltransferase
L3_129_000G1_scaffold_6344_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1197..1688)
DNA (492bp) protein (164aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Bacteroides vulgatus RepID=R9H4C1_BACVU
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KDS54227.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_129_000G1_scaffold_6344_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1734..2258)
DNA (525bp) protein (175aa)
Acetyltransferase n=5 Tax=Bacteroides RepID=A6KYL4_BACV8
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EOR98619.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_6344_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2268..4049)
DNA (1782bp) protein (594aa)
Peptidase, M24 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB62_BACVU
Metallopeptidase M24 family protein {ECO:0000313|EMBL:KDS27900.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
aminopeptidase
L3_129_000G1_scaffold_6344_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4218..4409
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=14 Tax=Bacteroides RepID=RS21_BACV8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_129_000G1_scaffold_6344_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4487..5368
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=6 Tax=Bacteroides RepID=A6KYL1_BACV8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_6344_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5383..5682
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=7 Tax=Bacteroides RepID=A6KYL0_BACV8
sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:KDS27897.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_6344_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6021..7205
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=7 Tax=Bacteroides RepID=EFTU_BACV8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_129_000G1_scaffold_6344_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7352..7546
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=5 Tax=Bacteroides RepID=C6Z0J3_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
preprotein translocase subunit SecE
L3_129_000G1_scaffold_6344_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7560..8102
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=7 Tax=Bacteroides RepID=A6KYK8_BACV8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_129_000G1_scaffold_6344_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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8163..8297
DNA (135bp) protein (45aa)
50S ribosomal protein L11 id=2621333 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
50S ribosomal protein L11
Tax=GWE2_Bacteroidetes_42_39_curated
L3_129_000G1_scaffold_6344_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8515..9213
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=7 Tax=Bacteroides RepID=RL1_BACV8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_129_000G1_scaffold_6344_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


9229..9747
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=7 Tax=Bacteroides RepID=A6KYK5_BACV8
rplJ; 50S ribosomal protein L10
Uncharacterized protein {ECO:0000313|EMBL:EIY78641.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_129_000G1_scaffold_6344_14
unknown

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9794..9868
DNA (75bp) protein (25aa)
LSU ribosomal protein L12P
Displaying 14 items

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