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L3_129_000G1_scaffold_4175

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_4175_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..877)
DNA (876bp) protein (292aa)
IS66 family element, transposase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V2X1_BACUN
IS66 family element, transposase {ECO:0000313|EMBL:EDO54437.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
transposase
L3_129_000G1_scaffold_4175_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(950..1285)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V2X0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO54436.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_129_000G1_scaffold_4175_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1800..2366)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KDS66319.1}; EC=5.1.3.13 {ECO:0000313|EMBL:KDS66319.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
rfbC_2; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Parabacteroides RepID=E1YV01_9PORP
L3_129_000G1_scaffold_4175_4
unknown

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comp(2913..3035)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_129_000G1_scaffold_4175_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3090..4001)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2ALF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS19914.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Nucleoside-diphosphate-sugar epimerases
L3_129_000G1_scaffold_4175_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4007..5101)
DNA (1095bp) protein (365aa)
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EDM19824.1}; EC=4.2.1.45 {ECO:0000313|EMBL:EDM19824.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
CDP-glucose 4,6-dehydratase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJJ4_9BACE
putative LPS biosynthesis DNTP-hexose dehydratase-epimerase
L3_129_000G1_scaffold_4175_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5114..5929)
DNA (816bp) protein (272aa)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M778_9BACE
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:EGN00026.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase
L3_129_000G1_scaffold_4175_8
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

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comp(5926..6933)
DNA (1008bp) protein (336aa)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HI94_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDE39334.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
glycosyl transferase
L3_129_000G1_scaffold_4175_9
Vibrio fortis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6930..8150)
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN28693.1}; TaxID=212667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fortis.;"
Type I phosphodiesterase/nucleotide pyrophosphatase id=4189492 bin=GWC2_Nitrospirae_57_13 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
L3_129_000G1_scaffold_4175_10
unknown

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comp(8152..9219)
DNA (1068bp) protein (356aa)

This feature has no annotations

L3_129_000G1_scaffold_4175_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9322..9714)
DNA (393bp) protein (131aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides sp. D20 RepID=D2F287_9BACE
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KEJ85522.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_129_000G1_scaffold_4175_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9719..10393)
DNA (675bp) protein (225aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides sp. D20 RepID=D2F287_9BACE
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KEJ85522.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_129_000G1_scaffold_4175_13
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10395..11255)
DNA (861bp) protein (287aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZS34_9BACE
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGJ72055.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
reductase
L3_129_000G1_scaffold_4175_14
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11334..12425)
DNA (1092bp) protein (364aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGJ72056.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EGJ72056.1};; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
UDP-glucose 4-epimerase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZS35_9BACE
dehydratase
L3_129_000G1_scaffold_4175_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12914..13507)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VCW1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV25310.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_129_000G1_scaffold_4175_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13553..14086)
DNA (534bp) protein (178aa)
Transcription termination/antitermination factor NusG n=1 Tax=Bacteroides sp. D20 RepID=D2F0M5_9BACE
Transcription termination factor nusG family protein {ECO:0000313|EMBL:KDS50427.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
NGN domain-containing protein
Displaying 16 items

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