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L3_129_000G1_scaffold_4470

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_4470_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..110)
DNA (108bp) protein (36aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PNM9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM96950.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_129_000G1_scaffold_4470_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(341..736)
DNA (396bp) protein (132aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=I8V0E3_9BACE
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:KDS24978.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_129_000G1_scaffold_4470_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(741..995)
DNA (255bp) protein (85aa)
Uncharacterized protein n=10 Tax=Bacteroidetes RepID=B3CCH6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY91137.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_129_000G1_scaffold_4470_4
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1177..3186)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii dnLKV18 RepID=S0GMX0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EIY47497.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
Type IV secretory pathway, VirD4 components
L3_129_000G1_scaffold_4470_5
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3224..4369)
DNA (1146bp) protein (382aa)
Relaxase/Mobilisation nuclease domain n=5 Tax=Bacteroidales RepID=D4IN61_9BACT
Relaxase/Mobilisation nuclease domain.
Relaxase/mobilization nuclease domain-containing protein {ECO:0000313|EMBL:EFV28011.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
L3_129_000G1_scaffold_4470_6
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4363..4785)
DNA (423bp) protein (141aa)
Uncharacterized protein n=12 Tax=Bacteroidetes RepID=B3JGB8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY47499.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
L3_129_000G1_scaffold_4470_7
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5489..6241
DNA (753bp) protein (251aa)
Conjugative transposon protein TraA n=6 Tax=Bacteroidales RepID=D7IKC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV28008.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
ATPases involved in chromosome partitioning
L3_129_000G1_scaffold_4470_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6248..6670
DNA (423bp) protein (141aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=B3CCI2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91134.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Protein of unknown function (DUF3408).
L3_129_000G1_scaffold_4470_9
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6712..7131
DNA (420bp) protein (140aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=B3CCI3_9BACE
Conjugative transfer protein TraB {ECO:0000313|EMBL:EFI02063.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Protein of unknown function (DUF3408).
L3_129_000G1_scaffold_4470_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7128..7868
DNA (741bp) protein (247aa)
Conserved domain protein n=7 Tax=Bacteroidetes RepID=F3XPP0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64378.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_129_000G1_scaffold_4470_11
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8014..8316
DNA (303bp) protein (101aa)
Conjugative transposon protein TraE n=8 Tax=Bacteroidetes RepID=F3XPN9_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKU87927.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
L3_129_000G1_scaffold_4470_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8340..8663
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0D5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19900.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_129_000G1_scaffold_4470_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8660..8890
DNA (231bp) protein (77aa)
TraG family conjugation system ATPase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GL32_9BACE
TraG family conjugation system ATPase {ECO:0000313|EMBL:EIY19899.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
conserved hypothetical protein found on conjugate transposon
L3_129_000G1_scaffold_4470_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9391..11118
DNA (1728bp) protein (576aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=2 Tax=Bacteroides RepID=D4V503_BACVU
Reverse transcriptase family protein {ECO:0000313|EMBL:EXZ29035.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
reverse transcriptase
L3_129_000G1_scaffold_4470_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11099..11347
DNA (249bp) protein (83aa)
TraG family conjugation system ATPase n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9G6E0_9BACE
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:KDS24965.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
traG; conjugative transposon protein TraG
L3_129_000G1_scaffold_4470_16
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11500..11802
DNA (303bp) protein (101aa)
Conjugative transposon protein TraG n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5X4B6_9BACE
TraG family conjugation system ATPase {ECO:0000313|EMBL:EIY41954.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
conjugation system ATPase, TraG family
L3_129_000G1_scaffold_4470_17
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12283..13944
DNA (1662bp) protein (554aa)
Retron-type reverse transcriptase n=7 Tax=Bacteroidetes RepID=I3YJA2_ALIFI
Retron-type reverse transcriptase {ECO:0000313|EMBL:AFL77070.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Retron-type reverse transcriptase
L3_129_000G1_scaffold_4470_18
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13941..14174
DNA (234bp) protein (78aa)
Conjugation system ATPase, TraG family n=5 Tax=Bacteroidetes RepID=B3CCI9_9BACE
Conjugative transposon protein TraG {ECO:0000313|EMBL:EFI02058.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
conjugal transfer protein TraG
Displaying 18 items

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