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L3_129_000G1_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_171_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Phage/plasmid primase, P4 family domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IU97_9FIRM
Phage/plasmid primase, P4 family domain-containing protein {ECO:0000313|EMBL:EOS25500.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
phage/plasmid primase, P4 family, C-terminal domain protein
L3_129_000G1_scaffold_171_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..536)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19654.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_171_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(609..1376)
DNA (768bp) protein (256aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=A5KQR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26139.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
XRE family transcriptional regulator
L3_129_000G1_scaffold_171_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1658..2677
DNA (1020bp) protein (340aa)
CAAX amino terminal protease family protein n=5 Tax=Clostridiales RepID=A5KQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26138.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
metal-dependent membrane protease
L3_129_000G1_scaffold_171_5
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2783..4840)
DNA (2058bp) protein (686aa)
2-enoate reductase (EC:1.3.1.31)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Lachnospiraceae RepID=A5KQR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85754.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_129_000G1_scaffold_171_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4844..5860)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QVB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26136.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_171_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6350..8362)
DNA (2013bp) protein (671aa)
Gram-positive signal peptide protein, YSIRK family n=4 Tax=Lachnospiraceae RepID=A5KQR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85757.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L3_129_000G1_scaffold_171_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8451..8978)
DNA (528bp) protein (176aa)
Sigma-70 region 2 n=5 Tax=Clostridiales RepID=A5KQR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26133.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
RNA polymerase sigma factor, sigma-70 family
L3_129_000G1_scaffold_171_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9275..11176)
DNA (1902bp) protein (634aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=4 Tax=Clostridiales RepID=A5KQR9_9FIRM
L3_129_000G1_scaffold_171_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11524..12891
DNA (1368bp) protein (456aa)
MATE efflux family protein n=4 Tax=Lachnospiraceae RepID=A5KQS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85760.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
putative efflux protein, MATE family
L3_129_000G1_scaffold_171_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12944..15556)
DNA (2613bp) protein (871aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Histidine kinase A domain protein n=5 Tax=Clostridiales RepID=A5KQS2_9FIRM
Signal transduction histidine kinase
L3_129_000G1_scaffold_171_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15615..16313)
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=5 Tax=Clostridiales RepID=A5KQS3_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFV19644.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_129_000G1_scaffold_171_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16714..17610
DNA (897bp) protein (299aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QC20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26128.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
dpaA; dipicolinate synthase subunit A
L3_129_000G1_scaffold_171_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17642..18235
DNA (594bp) protein (198aa)
Dipicolinic acid synthetase n=5 Tax=Clostridiales RepID=E5XG97_9FIRM
Dipicolinic acid synthetase {ECO:0000313|EMBL:EGG85764.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
spoVFB; dipicolinate synthase subunit B
L3_129_000G1_scaffold_171_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18253..20115
DNA (1863bp) protein (621aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EDK23245.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EDK23245.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQS7_9FIRM
L3_129_000G1_scaffold_171_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20191..22596)
DNA (2406bp) protein (802aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QBQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26125.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
X-X-X-Leu-X-X-Gly heptad repeats
L3_129_000G1_scaffold_171_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22653..24740)
DNA (2088bp) protein (696aa)
Antibiotic ABC transporter n=4 Tax=Clostridiales RepID=E5XG94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26124.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted exporters of the RND superfamily
L3_129_000G1_scaffold_171_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24919..25518
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=5 Tax=Clostridiales RepID=A5KQT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26123.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Transcriptional regulator
L3_129_000G1_scaffold_171_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25818..28892)
DNA (3075bp) protein (1025aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5KQT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26122.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_171_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28991..32173)
DNA (3183bp) protein (1061aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19676.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_129_000G1_scaffold_171_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32292..33713)
DNA (1422bp) protein (474aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNI9_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDK23927.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_129_000G1_scaffold_171_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33706..35376)
DNA (1671bp) protein (557aa)
O-antigen polymerase n=2 Tax=Clostridiales RepID=A5KNI8_9FIRM
O-antigen polymerase {ECO:0000313|EMBL:EDK23926.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_129_000G1_scaffold_171_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35472..36299)
DNA (828bp) protein (276aa)
Cohesin domain protein n=5 Tax=Clostridiales RepID=A5KNI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26117.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ATPase AAA containing von Willebrand factor type A (vWA) domain-like
L3_129_000G1_scaffold_171_24
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36469..38982)
DNA (2514bp) protein (838aa)
LPXTG-motif cell wall anchor domain protein n=5 Tax=Clostridiales RepID=A5KNI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85776.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_129_000G1_scaffold_171_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39307..40281
DNA (975bp) protein (325aa)
Glycosyl hydrolase family 25 n=5 Tax=Clostridiales RepID=A5KPV8_9FIRM
Glycosyl hydrolase, family 25 {ECO:0000313|EMBL:EFV19748.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
glycosyl hydrolases 25 family protein
L3_129_000G1_scaffold_171_26
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40644..41063)
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19747.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_129_000G1_scaffold_171_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41157..41576)
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25992.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_171_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41609..42166)
DNA (558bp) protein (186aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QBL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25993.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
TetR family transcriptional regulator
L3_129_000G1_scaffold_171_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42408..48308)
DNA (5901bp) protein (1967aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 8_1_57FAA RepID=E5XG79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25994.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
alpha-L-fucosidase
L3_129_000G1_scaffold_171_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48585..49364)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QBA9_9FIRM
Displaying items 1-30 of 91 in total

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