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L3_129_000G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_175_1
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(232..729)
DNA (498bp) protein (166aa)
Lincosamide resistance protein n=5 Tax=root RepID=I3WHJ5_BIFBI
linA; lincosamide resistance protein
Lincosamide resistance protein {ECO:0000313|EMBL:CCX82131.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_129_000G1_scaffold_175_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(814..2358)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=S2Y105_9FIRM
yheS; ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFL04359.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_129_000G1_scaffold_175_3
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2812..3189)
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5E177_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84954.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L3_129_000G1_scaffold_175_4
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3216..4376)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5DXG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84955.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
mob; Mob
L3_129_000G1_scaffold_175_5
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4711..5865)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=I3WHJ8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD55992.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_129_000G1_scaffold_175_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5855..6190)
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=I3WHJ9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04362.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_129_000G1_scaffold_175_7
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6180..7271)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PAR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX84958.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Site-specific recombinase XerD
L3_129_000G1_scaffold_175_8
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7272..7460)
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5E182_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01243.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_129_000G1_scaffold_175_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7909..8439
DNA (531bp) protein (177aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5DXH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55988.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Helix-turn-helix.
L3_129_000G1_scaffold_175_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8718..10169)
DNA (1452bp) protein (484aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Clostridiales RepID=F3AX68_9FIRM
L3_129_000G1_scaffold_175_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10434..10661)
DNA (228bp) protein (76aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26551.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
PTS HPr component phosphorylation site.
L3_129_000G1_scaffold_175_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10846..12396)
DNA (1551bp) protein (517aa)
Response regulator receiver domain protein n=4 Tax=Lachnospiraceae RepID=A5KPH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83103.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
AraC family transcriptional regulator
L3_129_000G1_scaffold_175_13
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12512..12772)
DNA (261bp) protein (87aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J323_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EOS28574.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Stage III sporulation protein D.
L3_129_000G1_scaffold_175_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12853..14049)
DNA (1197bp) protein (399aa)
Sodium/hydrogen exchanger n=4 Tax=Clostridiales RepID=E5XFB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27233.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cdu2; Na(+)/H(+) antiporter
L3_129_000G1_scaffold_175_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14483..14629)
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QLJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83115.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_129_000G1_scaffold_175_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14665..25809)
DNA (11145bp) protein (3715aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83116.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
zmpB1; zinc metalloprotease ZmpB
L3_129_000G1_scaffold_175_17
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25828..26445)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83117.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_129_000G1_scaffold_175_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26688..28430)
DNA (1743bp) protein (581aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=4 Tax=Clostridiales RepID=E5XFB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83118.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_129_000G1_scaffold_175_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28432..30156)
DNA (1725bp) protein (575aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=2 Tax=unclassified Lachnospiraceae RepID=E5XFB4_9FIRM
ABC transporter {ECO:0000313|EMBL:EFV20026.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_175_20
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30153..30728)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83120.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
N-acetyltransferase GCN5
L3_129_000G1_scaffold_175_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30820..31629
DNA (810bp) protein (270aa)
Transcriptional regulator, MerR family n=5 Tax=Clostridiales RepID=A5KPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27240.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
MerR family transcriptional regulator
L3_129_000G1_scaffold_175_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31616..32659)
DNA (1044bp) protein (348aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.1)
Uncharacterized protein n=3 Tax=root RepID=R5QY40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27241.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_129_000G1_scaffold_175_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32702..32980)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20022.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_175_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33147..35303)
DNA (2157bp) protein (719aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=4 Tax=Lachnospiraceae PF7_9FIRM">RepID=A5KPF7_9FIRM
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:EFV20021.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_129_000G1_scaffold_175_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35375..35554)
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Clostridiales PF6_9FIRM">RepID=A5KPF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27246.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_175_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35567..36460)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF5_9FIRM">RepID=A5KPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27247.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter
L3_129_000G1_scaffold_175_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36476..37366)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF4_9FIRM">RepID=A5KPF4_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV20018.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter permease
L3_129_000G1_scaffold_175_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37483..38904)
DNA (1422bp) protein (474aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=5 Tax=Clostridiales PF3_9FIRM">RepID=A5KPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27249.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
carbohydrate ABC transporter substrate-binding protein
L3_129_000G1_scaffold_175_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39160..39999
DNA (840bp) protein (280aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27250.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_175_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40010..41362)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=5 Tax=Clostridiales PF0_9FIRM">RepID=A5KPF0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV20015.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
MATE efflux family protein
Displaying items 1-30 of 94 in total

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