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L3_129_000G1_scaffold_511

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_511_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..1112)
DNA (885bp) protein (295aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=5 Tax=Clostridiales RepID=A5KJ03_9FIRM
L3_129_000G1_scaffold_511_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1140..1646)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=5 Tax=Clostridiales RepID=A5KJ02_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
16S rRNA processing protein RimM
L3_129_000G1_scaffold_511_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1781..2008)
DNA (228bp) protein (76aa)
UPF0109 protein RUMTOR_00197 n=5 Tax=Clostridiales RepID=A5KJ01_9FIRM
UPF0109 protein HMPREF1026_01655 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
RNA-binding protein (KH domain)
L3_129_000G1_scaffold_511_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2032..2277)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=5 Tax=Clostridiales RepID=A5KJ00_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
SSU ribosomal protein S16P
L3_129_000G1_scaffold_511_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2324..3685)
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=5 Tax=Clostridiales RepID=A5KIZ9_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
signal recognition particle protein
L3_129_000G1_scaffold_511_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3760..4110)
DNA (351bp) protein (117aa)
Helix-turn-helix protein n=5 Tax=Clostridiales RepID=E5XHP7_9FIRM
UPF0122 protein BN734_00758 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_511_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4167..5096)
DNA (930bp) protein (310aa)
Peptidase, S8/S53 family n=4 Tax=Clostridiales RepID=A5KIZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88619.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Subtilisin-like serine proteases
L3_129_000G1_scaffold_511_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5527..5679)
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QE58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19209.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_129_000G1_scaffold_511_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5813..6322
DNA (510bp) protein (170aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26877.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_129_000G1_scaffold_511_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6361..6648
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XHP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88623.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_129_000G1_scaffold_511_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6662..7138)
DNA (477bp) protein (159aa)
Thioesterase family protein n=5 Tax=Clostridiales RepID=A5KIZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26851.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
thioesterase superfamily protein
L3_129_000G1_scaffold_511_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7372..8130
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Pseudouridylate synthase (EC:5.4.99.12)
tRNA pseudouridine synthase n=4 Tax=Clostridiales RepID=E5XHP0_9FIRM
L3_129_000G1_scaffold_511_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8127..10463)
DNA (2337bp) protein (779aa)
Ferrous iron transport protein B n=5 Tax=Clostridiales RepID=A5KIY8_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:CCZ26849.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ferrous iron transporter FeoB
L3_129_000G1_scaffold_511_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10688..11560
DNA (873bp) protein (291aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QE31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26848.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_511_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11658..15473)
DNA (3816bp) protein (1272aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KIY5_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDK25288.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_129_000G1_scaffold_511_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15553..16335)
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KIY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26846.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
PpiC-type peptidyl-prolyl cis-trans isomerase
L3_129_000G1_scaffold_511_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16434..16967)
DNA (534bp) protein (178aa)
PAP2 family protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KIY2_9FIRM
PAP2 family protein {ECO:0000313|EMBL:EDK25285.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Membrane-associated phospholipid phosphatase
L3_129_000G1_scaffold_511_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17010..18104)
DNA (1095bp) protein (365aa)
CbiG n=4 Tax=root RepID=A5KIY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88446.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
cobalamin (vitamin B12) biosynthesis protein CbiG
L3_129_000G1_scaffold_511_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18340..19512)
DNA (1173bp) protein (391aa)
Alcohol dehydrogenase, iron-dependent n=5 Tax=Clostridiales RepID=A5KIY0_9FIRM
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EFV19198.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_129_000G1_scaffold_511_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19584..20741)
DNA (1158bp) protein (386aa)
Peptidoglycan-binding LysM n=5 Tax=Clostridiales RepID=E5XHN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26842.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
glycoside hydrolase
L3_129_000G1_scaffold_511_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20788..21672)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JF63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19196.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted membrane protein
L3_129_000G1_scaffold_511_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22170..23546)
DNA (1377bp) protein (459aa)
DNA repair protein radA n=5 Tax=Clostridiales RepID=A5KIX6_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA repair protein RadA
L3_129_000G1_scaffold_511_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23720..24133)
DNA (414bp) protein (138aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19194.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_129_000G1_scaffold_511_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24256..26700)
DNA (2445bp) protein (815aa)
ATPase family associated with various cellular activities (AAA) n=5 Tax=Clostridiales RepID=A5KIX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26838.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ATPases with chaperone activity, ATP-binding subunit
L3_129_000G1_scaffold_511_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26747..27115)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=A5KIX3_9FIRM
GntR family Transcriptional regulator {ECO:0000313|EMBL:EFV19192.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
transcriptional regulator, GntR family
L3_129_000G1_scaffold_511_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27272..28606)
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Clostridiales RepID=A5KIX2_9FIRM
L3_129_000G1_scaffold_511_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28603..29277)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=5 Tax=Clostridiales RepID=A5KIX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26835.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_129_000G1_scaffold_511_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29309..29977)
DNA (669bp) protein (223aa)
Phosphate-specific transport system accessory protein PhoU n=5 Tax=Clostridiales RepID=A5KIX0_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
phosphate uptake regulator, PhoU
L3_129_000G1_scaffold_511_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30435..31625)
DNA (1191bp) protein (397aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
LL-diaminopimelate aminotransferase n=5 Tax=Clostridiales RepID=A5KIW9_9FIRM
LL-diaminopimelate aminotransferase
L3_129_000G1_scaffold_511_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31650..34829)
DNA (3180bp) protein (1060aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=6 Tax=root RepID=A5KIW8_9FIRM
Displaying items 1-30 of 49 in total

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