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L3_129_000G1_scaffold_1552

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1552_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(154..423)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17692.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_129_000G1_scaffold_1552_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(410..1561)
DNA (1152bp) protein (384aa)
Peptidase, M56 family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE89_9FIRM
Peptidase, M56 family {ECO:0000313|EMBL:EDM63928.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
peptidase M56
L3_129_000G1_scaffold_1552_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1569..1955)
DNA (387bp) protein (129aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE88_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EDM63927.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Penicillinase repressor.
L3_129_000G1_scaffold_1552_4
unknown

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2175..2351
DNA (177bp) protein (59aa)

This feature has no annotations

L3_129_000G1_scaffold_1552_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2591..4729
DNA (2139bp) protein (713aa)
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39 n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E342_9FIRM
bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39 {ECO:0000313|EMBL:CBK89832.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000G1_scaffold_1552_6
unknown

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4748..5419
DNA (672bp) protein (224aa)

This feature has no annotations

L3_129_000G1_scaffold_1552_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5492..6187
DNA (696bp) protein (232aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL30173.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL30173.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003667636
ABC transporter ATP-binding protein
L3_129_000G1_scaffold_1552_8
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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6177..8747
DNA (2571bp) protein (857aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003616AF2
Uncharacterized protein {ECO:0000313|EMBL:EOS45982.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_129_000G1_scaffold_1552_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8826..9974)
DNA (1149bp) protein (383aa)
YibE/F-like protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KN19_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:EDK24185.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_129_000G1_scaffold_1552_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9994..12393)
DNA (2400bp) protein (800aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KN18_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDK24184.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Calcineurin-like phosphoesterase
L3_129_000G1_scaffold_1552_11
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13746..13991
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B4F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ35321.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
glycoside hydrolase family protein
L3_129_000G1_scaffold_1552_12
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14031..14474
DNA (444bp) protein (148aa)
Mannose-6-phosphate isomerase, class I n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JN81_9FIRM
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EOS32602.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_129_000G1_scaffold_1552_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14547..15680
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8N5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20216.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
CdaR family transcriptional regulator
L3_129_000G1_scaffold_1552_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15802..16935
DNA (1134bp) protein (378aa)
Glycerate kinase {ECO:0000313|EMBL:EDM86930.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EDM86930.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUA3_9FIRM
L3_129_000G1_scaffold_1552_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17020..18210)
DNA (1191bp) protein (397aa)
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6G1_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CBL26823.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_129_000G1_scaffold_1552_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18581..20512
DNA (1932bp) protein (644aa)
Transcriptional antiterminator n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6G0_9FIRM
Transcriptional antiterminator
Transcriptional antiterminator {ECO:0000313|EMBL:CBL26822.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_129_000G1_scaffold_1552_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20564..21019
DNA (456bp) protein (152aa)
PTS system, fructose subfamily, IIA component (EC:2.7.1.69)
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:CBL26821.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL26821.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
PTS system, fructose subfamily, IIA component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F9_9FIRM
L3_129_000G1_scaffold_1552_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21027..21335
DNA (309bp) protein (103aa)
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system, fructose-specific, IIB component {ECO:0000313|EMBL:CBL26820.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL26820.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
PTS system, fructose-specific, IIB component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F8_9FIRM
L3_129_000G1_scaffold_1552_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21338..22420
DNA (1083bp) protein (361aa)
PTS system, fructose subfamily, IIC component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F7_9FIRM
PTS system, fructose subfamily, IIC component
PTS system, fructose subfamily, IIC component {ECO:0000313|EMBL:CBL26819.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_129_000G1_scaffold_1552_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22493..23377
DNA (885bp) protein (295aa)
ketose-bisphosphate aldolases (EC:4.1.2.13)
Ketose-bisphosphate aldolases {ECO:0000313|EMBL:CBL26818.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL26818.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ketose-bisphosphate aldolases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F6_9FIRM
L3_129_000G1_scaffold_1552_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23414..24025
DNA (612bp) protein (204aa)
Nuclease-related domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F5_9FIRM
Nuclease-related domain.
Nuclease-related domain {ECO:0000313|EMBL:CBL26817.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_129_000G1_scaffold_1552_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24038..25648
DNA (1611bp) protein (537aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:CBL26815.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CBL26815.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F3_9FIRM
L3_129_000G1_scaffold_1552_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25642..27228
DNA (1587bp) protein (529aa)
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetate CoA-transferase YdiF n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F2_9FIRM
L3_129_000G1_scaffold_1552_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27233..28111
DNA (879bp) protein (293aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CBL26813.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CBL26813.1};; EC=1.1.1.35 {ECO:0000313|EMBL:CBL26813.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F1_9FIRM
L3_129_000G1_scaffold_1552_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28177..29358
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CBL26812.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CBL26812.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetyl-CoA acetyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6F0_9FIRM
Displaying 25 items

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