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L3_129_000G1_scaffold_1673

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1673_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(193..1374)
DNA (1182bp) protein (394aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=5 Tax=Clostridiales RepID=A5KQ70_9FIRM
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EFV20281.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_1673_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1595..2953
DNA (1359bp) protein (453aa)
PDZ domain-containing protein n=5 Tax=Clostridiales RepID=E5XEU1_9FIRM
PDZ domain-containing protein {ECO:0000313|EMBL:EFV20280.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L3_129_000G1_scaffold_1673_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2966..4291
DNA (1326bp) protein (442aa)
GTPase Der n=5 Tax=Clostridiales RepID=A5KQ68_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ribosome-associated GTPase EngA
L3_129_000G1_scaffold_1673_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4298..4957
DNA (660bp) protein (220aa)
Glycerol-3-phosphate acyltransferase n=6 Tax=root RepID=A5KQ67_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_129_000G1_scaffold_1673_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4961..5974
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=5 Tax=root RepID=A5KQ66_9FIRM
L3_129_000G1_scaffold_1673_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6033..7505
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=4 Tax=Clostridiales RepID=E5XET7_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CCZ26201.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
stage IV sporulation protein A
L3_129_000G1_scaffold_1673_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7580..8422
DNA (843bp) protein (281aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=5 Tax=Clostridiales RepID=A5KQ64_9FIRM
L3_129_000G1_scaffold_1673_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8433..9752
DNA (1320bp) protein (440aa)
Amidohydrolase family protein n=5 Tax=Clostridiales RepID=A5KQ63_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CCZ26199.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Cytosine deaminase and related metal-dependent hydrolases
L3_129_000G1_scaffold_1673_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9850..10314
DNA (465bp) protein (155aa)
Molybdopterin binding domain protein n=3 Tax=Clostridiales RepID=A5KQ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26198.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Molybdopterin biosynthesis enzymes
L3_129_000G1_scaffold_1673_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10311..11012
DNA (702bp) protein (234aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84335.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_129_000G1_scaffold_1673_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11003..11482
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=5 Tax=Clostridiales RepID=A5KQ60_9FIRM
L3_129_000G1_scaffold_1673_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11961..12992
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=5 Tax=Clostridiales RepID=A5KQ59_9FIRM
L3_129_000G1_scaffold_1673_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13144..13587)
DNA (444bp) protein (148aa)
Aspartate carbamoyltransferase n=2 Tax=unclassified Lachnospiraceae RepID=E5XET0_9FIRM
Aspartate carbamoyltransferase {ECO:0000313|EMBL:EFV20269.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_129_000G1_scaffold_1673_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13609..14529)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=4 Tax=Clostridiales RepID=E5XES9_9FIRM
L3_129_000G1_scaffold_1673_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14898..16028
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=3 Tax=Clostridiales RepID=A5KQ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26192.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_129_000G1_scaffold_1673_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16124..17416
DNA (1293bp) protein (431aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ54_9FIRM
ATPase with chaperone activity {ECO:0000313|EMBL:EFV20266.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted ATPase (AAA+ superfamily)
L3_129_000G1_scaffold_1673_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17528..19270)
DNA (1743bp) protein (581aa)
Fibronectin-binding protein A domain protein n=4 Tax=Clostridiales RepID=A5KQ53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26190.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L3_129_000G1_scaffold_1673_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19500..20378
DNA (879bp) protein (293aa)
TIGR00255 family protein n=5 Tax=Clostridiales RepID=A5KQ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26189.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
conserved hypothetical protein TIGR00255
L3_129_000G1_scaffold_1673_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20390..21025
DNA (636bp) protein (212aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=5 Tax=Clostridiales RepID=E5XES4_9FIRM
L3_129_000G1_scaffold_1673_20
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21028..21276
DNA (249bp) protein (83aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=5 Tax=Clostridiales RepID=E5XES3_9FIRM
L3_129_000G1_scaffold_1673_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21395..22717
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AW18_9FIRM
L3_129_000G1_scaffold_1673_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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22714..23256
DNA (543bp) protein (181aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Clostridiales RepID=A5KQ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20260.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_1673_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23259..23774
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QIN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26184.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
competence/damage-inducible protein CinA C-terminal domain
L3_129_000G1_scaffold_1673_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23969..24661
DNA (693bp) protein (231aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26183.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_1673_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24710..25720
DNA (1011bp) protein (337aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=A5KQ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23386.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_129_000G1_scaffold_1673_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25922..26320
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QVF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84444.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_129_000G1_scaffold_1673_27
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26452..27174)
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QBV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84445.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Displaying 27 items

View Taxonomy