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L3_129_000G1_scaffold_1906

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1906_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(143..1006)
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KJZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26735.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter
L3_129_000G1_scaffold_1906_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1012..1386)
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=A5KJZ4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EFV20569.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
GntR family transcriptional regulator
L3_129_000G1_scaffold_1906_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1473..2207)
DNA (735bp) protein (245aa)
ABC-2 type transporter n=5 Tax=Clostridiales RepID=A5KJZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26737.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_129_000G1_scaffold_1906_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2204..3055)
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein n=5 Tax=Clostridiales RepID=E5XDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26738.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter ATP-binding protein
L3_129_000G1_scaffold_1906_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3307..3834)
DNA (528bp) protein (176aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KJZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26739.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
protocadherin domain
L3_129_000G1_scaffold_1906_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4111..5484
DNA (1374bp) protein (458aa)
MATE efflux family protein n=5 Tax=root RepID=E5XDM6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV20573.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative efflux protein, MATE family
L3_129_000G1_scaffold_1906_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5683..5970
DNA (288bp) protein (96aa)
Uncharacterized protein n=6 Tax=root RepID=A5KJZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20574.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized protein conserved in bacteria (DUF2325).
L3_129_000G1_scaffold_1906_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6118..6837)
DNA (720bp) protein (240aa)
S1 RNA binding domain protein n=5 Tax=Clostridiales RepID=A5KK02_9FIRM
Ribosomal protein S1 {ECO:0000313|EMBL:EFV20576.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Ribosomal protein S1
L3_129_000G1_scaffold_1906_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7094..8740
DNA (1647bp) protein (549aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
DRTGG domain protein n=5 Tax=Clostridiales RepID=A5KK03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27220.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_129_000G1_scaffold_1906_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8769..9368
DNA (600bp) protein (200aa)
Flavin reductase-like protein n=5 Tax=Clostridiales RepID=A5KK04_9FIRM
Flavin reductase-like protein {ECO:0000313|EMBL:EDK25657.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_129_000G1_scaffold_1906_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9460..10380
DNA (921bp) protein (307aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KK05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27218.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
dTDP-glucose pyrophosphorylase
L3_129_000G1_scaffold_1906_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10543..11559
DNA (1017bp) protein (339aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=5 Tax=Clostridiales RepID=A5KK06_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFV20580.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_129_000G1_scaffold_1906_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11710..12348)
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QY13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27216.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
VanZF
L3_129_000G1_scaffold_1906_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12659..14008
DNA (1350bp) protein (450aa)
LIVCS family branched chain amino acid:cation symporter n=3 Tax=Clostridiales RepID=E5XDN5_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CCZ27215.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
brnQ; branched-chain amino acid transport system II carrier protein
L3_129_000G1_scaffold_1906_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14191..15198
DNA (1008bp) protein (336aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27214.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cytR; DegA family transcriptional regulator
L3_129_000G1_scaffold_1906_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15344..15802
DNA (459bp) protein (153aa)
PTS system sorbose subfamily IIB component n=5 Tax=Clostridiales RepID=A5KK13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89124.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
PTS family mannose/fructose/sorbose porter component IIB
L3_129_000G1_scaffold_1906_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15891..16682
DNA (792bp) protein (264aa)
PTS system sorbose-specific iic component n=5 Tax=Clostridiales RepID=A5KK14_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EDK25667.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
pts; PTS family mannose/fructose/sorbose porter component IIC
L3_129_000G1_scaffold_1906_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16675..17529
DNA (855bp) protein (285aa)
PTS system mannose/fructose/sorbose family IID component n=5 Tax=Clostridiales RepID=A5KK15_9FIRM
PTS family mannose/fructose/sorbose porter component IID {ECO:0000313|EMBL:EFV20592.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
PTS family mannose/fructose/sorbose porter component IID
L3_129_000G1_scaffold_1906_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17563..17979
DNA (417bp) protein (139aa)
PTS system fructose IIA component n=5 Tax=Clostridiales RepID=A5KK16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26427.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
PTS system mannose/fructose-specific transporter subunit IIA
L3_129_000G1_scaffold_1906_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17972..19660
DNA (1689bp) protein (563aa)
malL; oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase) (EC:3.2.1.10)
Alpha amylase, catalytic domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KK17_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDK25670.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_129_000G1_scaffold_1906_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19778..21067
DNA (1290bp) protein (430aa)
cysD; putative O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QCK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26425.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_129_000G1_scaffold_1906_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21105..22037
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=5 Tax=Clostridiales RepID=A5KK21_9FIRM
L3_129_000G1_scaffold_1906_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22071..22502
DNA (432bp) protein (144aa)
Transcriptional regulator, Rrf2 family n=5 Tax=Clostridiales RepID=A5KK22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26423.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator, BadM/Rrf2 family
L3_129_000G1_scaffold_1906_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22502..23185
DNA (684bp) protein (228aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R0A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20598.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterised protein family (UPF0153).
L3_129_000G1_scaffold_1906_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23320..23769
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KK25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26421.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
Displaying 25 items

View Taxonomy