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L3_129_000G1_scaffold_2051

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_2051_1
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1087
DNA (1086bp) protein (362aa)
Bacterial group 3 Ig-like protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXR0_9CLOT
Bacterial group 3 Ig-like protein {ECO:0000313|EMBL:CDB74711.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
alpha-L-arabinofuranosidase
L3_129_000G1_scaffold_2051_2
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1258..2613
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6FTP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74710.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ABC transporter permease
L3_129_000G1_scaffold_2051_3
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2785..3177
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G254_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15446.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2051_4
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3315..3998
DNA (684bp) protein (228aa)
Transcriptional regulatory protein CutR n=1 Tax=Clostridium sp. CAG:265 RepID=R6KHP7_9CLOT
Transcriptional regulatory protein CutR {ECO:0000313|EMBL:CDB74708.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
cutR; transcriptional regulatory protein cutR
L3_129_000G1_scaffold_2051_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3991..5136
DNA (1146bp) protein (382aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=environmental samples RepID=R6FQF9_9CLOT
Signal transduction histidine kinase
L3_129_000G1_scaffold_2051_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5176..5841
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6G1T3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15449.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
two-component DNA-binding response regulator
L3_129_000G1_scaffold_2051_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5841..7319
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Sensor histidine kinase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FTP8_9CLOT
hypothetical protein
L3_129_000G1_scaffold_2051_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7430..8788
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6G260_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15451.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ABC transporter permease
L3_129_000G1_scaffold_2051_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8800..9426
DNA (627bp) protein (209aa)
ABC transporter n=2 Tax=environmental samples RepID=R6GMS1_9CLOT
ABC transporter {ECO:0000313|EMBL:CDB74703.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ABC transporter ATP-binding protein
L3_129_000G1_scaffold_2051_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9595..11847
DNA (2253bp) protein (751aa)
pflB2; formate acetyltransferase PflB (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FQG6_9CLOT
Formate acetyltransferase {ECO:0000313|EMBL:CDB15453.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2051_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11813..12607
DNA (795bp) protein (265aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
act2; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium sp. CAG:221 RepID=R6G1T8_9CLOT
L3_129_000G1_scaffold_2051_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12823..13809
DNA (987bp) protein (329aa)
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase (Conjugated bile acidhydrolase) (Cbah) (Bile salt hydrolase) n=1 Tax=Clostridium sp. CAG:221 RepID=R6FTQ3_9CLOT
Choloylglycine hydrolase (Conjugated bile acidhydrolase) (Cbah) (Bile salt hydrolase) {ECO:0000313|EMBL:CDB15455.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2051_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14007..14981
DNA (975bp) protein (325aa)
Oxidoreductase domain-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G265_9CLOT
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:CDB15456.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
oxidoreductase domain-containing protein
L3_129_000G1_scaffold_2051_14
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15281..16465
DNA (1185bp) protein (395aa)
thermostable carboxypeptidase 2 (EC:3.4.17.-)
Thermostable carboxypeptidase 2 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GMS8_9CLOT
Thermostable carboxypeptidase 2 {ECO:0000313|EMBL:CDB15457.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2051_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16599..17735
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FQH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15458.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
glycoprotein gp2
L3_129_000G1_scaffold_2051_16
unknown

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comp(18099..18242)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_129_000G1_scaffold_2051_17
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18340..19470
DNA (1131bp) protein (377aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G1U6_9CLOT
L3_129_000G1_scaffold_2051_18
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19631..20209
DNA (579bp) protein (193aa)
Regulatory protein TetR n=1 Tax=Clostridium sp. CAG:221 RepID=R6FTR2_9CLOT
Regulatory protein TetR {ECO:0000313|EMBL:CDB15460.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
transcriptional regulator
L3_129_000G1_scaffold_2051_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20383..22152
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G272_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15461.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
67 kDa myosin-cross-reactive antigen family protein
Displaying 19 items

View Taxonomy