ggKbase home page

L3_129_000G1_scaffold_2786

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_2786_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..128
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16029.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
integrase catalytic subunit
L3_129_000G1_scaffold_2786_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

601..1965
DNA (1365bp) protein (455aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNS9_CLOPF
sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein
Sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein {ECO:0000313|EMBL:EIA18021.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_129_000G1_scaffold_2786_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2027..2860)
DNA (834bp) protein (278aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CTM0_CLOPF
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIA18022.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_129_000G1_scaffold_2786_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3054..6086
DNA (3033bp) protein (1011aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNT2_CLOPF
L3_129_000G1_scaffold_2786_5
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6352..6654
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Urease subunit gamma n=2 Tax=environmental samples RepID=R6GRE0_9CLOT
hypothetical protein
L3_129_000G1_scaffold_2786_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6673..6999
DNA (327bp) protein (109aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Urease subunit beta n=2 Tax=environmental samples RepID=R6FU57_9CLOT
hypothetical protein
L3_129_000G1_scaffold_2786_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6999..8714
DNA (1716bp) protein (572aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ureC; Urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha n=2 Tax=environmental samples RepID=R6G5D7_9CLOT
L3_129_000G1_scaffold_2786_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8767..9219
DNA (453bp) protein (151aa)
Urease accessory protein UreE n=2 Tax=environmental samples RepID=R6FXB2_9CLOT
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
urease accessory protein UreE
L3_129_000G1_scaffold_2786_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9194..9919
DNA (726bp) protein (242aa)
Urease accessory protein UreF n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5Y7_9CLOT
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ureF; Urease accessory protein UreF
L3_129_000G1_scaffold_2786_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9969..10583
DNA (615bp) protein (205aa)
Urease accessory protein UreG n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRE5_9CLOT
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ureG; Urease accessory protein UreG
L3_129_000G1_scaffold_2786_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10585..11418
DNA (834bp) protein (278aa)
Urease accessory protein UreD n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU62_9CLOT
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ureD; urease accessory protein UreD
L3_129_000G1_scaffold_2786_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11609..11698
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6G5E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16759.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2786_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11745..12398
DNA (654bp) protein (218aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:265 RepID=R6KSK2_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
mgtE; magnesium transporter
L3_129_000G1_scaffold_2786_14
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12651..13178
DNA (528bp) protein (176aa)
Transcriptional regulatory protein ResD n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5Z2_9CLOT
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:CDB16761.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ResD family transcriptional regulator
L3_129_000G1_scaffold_2786_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13225..13749
DNA (525bp) protein (175aa)
alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRE8_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDB16762.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_2786_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14335..16272
DNA (1938bp) protein (646aa)
Internalin n=1 Tax=Listeria monocytogenes serotype 4bV str. LS642 RepID=U1WA30_LISMN
Cell wall/surface repeat-containing protein,Internalin-A,repeat,Listeria-Bacteroides repeat domain (List_Bact_rpt) {ECO:0000313|EMBL:CEK36467.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
cell wall/surface repeat-containing protein
Displaying 16 items

View Taxonomy