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L3_129_000G1_scaffold_1158

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1158_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1690..4251)
DNA (2562bp) protein (854aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
gyrA1; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXF4_9CLOT
L3_129_000G1_scaffold_1158_2
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4273..6186)
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
gyrB; DNA gyrase, B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5I1_9CLOT
L3_129_000G1_scaffold_1158_3
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6241..6501)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6FUA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16798.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_000G1_scaffold_1158_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6575..7663)
DNA (1089bp) protein (363aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRH5_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
recF; DNA replication and repair RecF family protein
L3_129_000G1_scaffold_1158_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7725..7928)
DNA (204bp) protein (68aa)
S4 domain-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G626_9CLOT
S4 domain-containing protein {ECO:0000313|EMBL:CDB16796.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
S4 domain-containing protein
L3_129_000G1_scaffold_1158_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7976..9076)
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXF0_9CLOT
L3_129_000G1_scaffold_1158_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9354..10718)
DNA (1365bp) protein (455aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5H7_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
dnaA; chromosomal replication initiator protein DnaA
L3_129_000G1_scaffold_1158_8
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11241..11375
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=environmental samples RepID=R6FU96_9CLOT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
rpmH; ribosomal protein L34
L3_129_000G1_scaffold_1158_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11437..11787
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rnpA; ribonuclease P protein component RnpA (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRH3_9CLOT
L3_129_000G1_scaffold_1158_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11787..11999
DNA (213bp) protein (71aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. CAG:221 RepID=R6G621_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_000G1_scaffold_1158_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12014..12781
DNA (768bp) protein (256aa)
60 kDa inner membrane insertion protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXE6_9CLOT
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:CDB16790.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
inner membrane protein translocase component YidC
L3_129_000G1_scaffold_1158_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12810..13433
DNA (624bp) protein (208aa)
SpoIIIJ-associated protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5H2_9CLOT
SpoIIIJ-associated protein {ECO:0000313|EMBL:CDB16789.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
putative RNA-binding protein
L3_129_000G1_scaffold_1158_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13567..14940
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU91_9CLOT
trmE; tRNA modification GTPase TrmE
L3_129_000G1_scaffold_1158_14
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14953..16854
DNA (1902bp) protein (634aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRH0_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_129_000G1_scaffold_1158_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16856..17575
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
gidB; 16S rRNA methyltransferase GidB (EC:2.1.1.170)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:221 RepID=R6G616_9CLOT
L3_129_000G1_scaffold_1158_16
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17681..18460
DNA (780bp) protein (260aa)
Stage 0 sporulation protein J n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXE0_9CLOT
Stage 0 sporulation protein J {ECO:0000313|EMBL:CDB16785.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ParB-like partition protein
L3_129_000G1_scaffold_1158_17
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18783..19544
DNA (762bp) protein (254aa)
Cobyrinic acid a c-diamide synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5G7_9CLOT
Cobyrinic acid a c-diamide synthase {ECO:0000313|EMBL:CDB16784.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cobQ/CobB/MinD/ParA nucleotide binding domain protein
L3_129_000G1_scaffold_1158_18
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19557..20435
DNA (879bp) protein (293aa)
Stage 0 sporulation protein J n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU87_9CLOT
Stage 0 sporulation protein J {ECO:0000313|EMBL:CDB16783.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
spo0J; stage 0 sporulation protein J
L3_129_000G1_scaffold_1158_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20474..20974
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16782.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_000G1_scaffold_1158_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21021..21563)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G612_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16781.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
yyaC3; putative sporulation protein YyaC
L3_129_000G1_scaffold_1158_21
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21652..22806)
DNA (1155bp) protein (385aa)
Cysteine desulfurase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXD5_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:CDB16780.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cysteine desulfurase
L3_129_000G1_scaffold_1158_22
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22982..23221
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16779.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_000G1_scaffold_1158_23
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23245..23427
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KW70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74176.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_129_000G1_scaffold_1158_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23539..23829
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRG1_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rpsF; 30S ribosomal protein S6
L3_129_000G1_scaffold_1158_25
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23846..24304
DNA (459bp) protein (153aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G607_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
single-strand binding protein
L3_129_000G1_scaffold_1158_26
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24342..24584
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=2 Tax=environmental samples RepID=R6FXD1_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rpsR; 30S ribosomal protein S18
L3_129_000G1_scaffold_1158_27
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24738..25055
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16774.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
MazG-like family
L3_129_000G1_scaffold_1158_28
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25077..27020
DNA (1944bp) protein (648aa)
Phosphoesterase domain-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU77_9CLOT
Phosphoesterase domain-containing protein {ECO:0000313|EMBL:CDB16773.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
putative signaling protein
L3_129_000G1_scaffold_1158_29
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27128..27574
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GRF6_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rplI; 50S ribosomal protein L9
L3_129_000G1_scaffold_1158_30
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27587..29479
DNA (1893bp) protein (631aa)
ATP-dependent proteinase La n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5Z9_9CLOT
ATP-dependent proteinase La {ECO:0000313|EMBL:CDB16771.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
lonC; ATP-dependent protease, Lon family
Displaying items 1-30 of 38 in total

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