ggKbase home page

L3_129_000G1_scaffold_3342

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_3342_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

131..826
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16040.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_000G1_scaffold_3342_2
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1505..2359)
DNA (855bp) protein (285aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3K0_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDB16039.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
AraC-type DNA-binding domain-containing proteins
L3_129_000G1_scaffold_3342_3
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2633..4531
DNA (1899bp) protein (633aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FSA1_9CLOT
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CDB16038.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_3342_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4515..5465
DNA (951bp) protein (317aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Beta galactosidase small chain. (EC:3.2.1.23)
Beta galactosidase small subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6GPH1_9CLOT
L3_129_000G1_scaffold_3342_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5487..6764
DNA (1278bp) protein (426aa)
GHMP kinase N-terminal domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3Y0_9CLOT
GHMP kinase N-terminal domain protein {ECO:0000313|EMBL:CDB16036.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
galactokinase
L3_129_000G1_scaffold_3342_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6778..7761
DNA (984bp) protein (328aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVF4_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDB16035.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_000G1_scaffold_3342_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7782..9263
DNA (1482bp) protein (494aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3J5_9CLOT
galactose-1-phosphate uridylyltransferase
L3_129_000G1_scaffold_3342_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9366..10415
DNA (1050bp) protein (350aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FS97_9CLOT
L3_129_000G1_scaffold_3342_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10437..10922
DNA (486bp) protein (162aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GPG7_9CLOT
L3_129_000G1_scaffold_3342_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11127..11462
DNA (336bp) protein (112aa)
Putative helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3X7_9CLOT
Putative helix-turn-helix protein {ECO:0000313|EMBL:CDB16031.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Helix-turn-helix.
L3_129_000G1_scaffold_3342_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11507..11917
DNA (411bp) protein (137aa)
Response regulator n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVE9_9CLOT
Response regulator {ECO:0000313|EMBL:CDB16030.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Response regulator of the LytR/AlgR family
L3_129_000G1_scaffold_3342_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11938..12759)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16029.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
integrase catalytic region
L3_129_000G1_scaffold_3342_13
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12813..12908)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IQG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES66704.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Displaying 13 items

View Taxonomy