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dasL3_129_000G1_maxbin2_maxbin_020_fasta_sub_fa

L3_129_000G1_public_Clostridium_sp__CAG_221_29_49
In projects: L3_129_000G1_public

Consensus taxonomy: Clostridium sp. CAG:221  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_129_000G1_scaffold_3342
Species: Clostridium sp. CAG:221 (92.31%)
13 12910 bp 36.41 36.79 87.89
L3_129_000G1_scaffold_6050
Genus: Clostridium (92.31%)
13 6242 bp 35.23 42.17 94.54
L3_129_000G1_scaffold_2244
Species: Clostridium sp. CAG:221 (100%)
13 20513 bp 28.44 35.25 90.50
L3_129_000G1_scaffold_2500
Species: Clostridium sp. CAG:221 (76.92%)
13 18359 bp 29.41 33.29 91.30
L3_129_000G1_scaffold_2530
Species: Clostridium sp. CAG:221 (91.67%)
12 18122 bp 30.23 36.38 84.86
L3_129_000G1_scaffold_3732
Species: Clostridium sp. CAG:221 (91.67%)
12 11287 bp 28.48 33.04 75.41
L3_129_000G1_scaffold_3290
Species: Clostridium sp. CAG:221 (58.33%)
12 13217 bp 26.39 32.46 87.82
L3_129_000G1_scaffold_7076
Species: Clostridium sp. CAG:221 (70%)
10 5237 bp 24.63 31.65 68.05
L3_129_000G1_scaffold_9473
Species: Clostridium sp. CAG:265 (100%)
10 3770 bp 34.96 44.24 93.82
L3_129_000G1_scaffold_4923
Species: Clostridium sp. CAG:221 (100%)
9 8020 bp 29.28 36.27 84.91
L3_129_000G1_scaffold_3995
Species: Clostridium sp. CAG:221 (100%)
9 10393 bp 27.51 33.11 83.28
L3_129_000G1_scaffold_4013
Species: Clostridium sp. CAG:221 (77.78%)
9 10327 bp 29.60 33.87 94.33
L3_129_000G1_scaffold_4049
Genus: Clostridium (88.89%)
9 10190 bp 23.85 29.26 93.18
L3_129_000G1_scaffold_4579
Species: Clostridium sp. CAG:221 (100%)
9 8678 bp 29.86 34.00 87.57
L3_129_000G1_scaffold_5798
Species: Clostridium sp. CAG:221 (87.5%)
8 6560 bp 27.55 30.00 81.95
L3_129_000G1_scaffold_3493
Species: Clostridium saccharobutylicum (50%)
8 12220 bp 24.54 30.01 69.97
L3_129_000G1_scaffold_7177
Species: Clostridium sp. CAG:221 (50%)
8 5158 bp 27.05 32.72 88.17
L3_129_000G1_scaffold_8350
Species: Clostridium sp. CAG:221 (75%)
8 4357 bp 24.31 26.75 53.02
L3_129_000G1_scaffold_5119
Species: Clostridium sp. CAG:221 (100%)
8 7620 bp 30.00 33.09 87.99
L3_129_000G1_scaffold_6829
Species: Clostridium sp. CAG:221 (62.5%)
8 5451 bp 28.95 47.41 79.64
L3_129_000G1_scaffold_10203
Species: Clostridium sp. CAG:265 (85.71%)
7 3491 bp 34.57 44.21 82.93
L3_129_000G1_scaffold_14552
Genus: Clostridium (57.14%)
7 2459 bp 28.30 10.92 81.01
L3_129_000G1_scaffold_2309
Species: Clostridium botulinum (57.14%)
7 19933 bp 25.53 31.74 97.83
L3_129_000G1_scaffold_9556
Species: Clostridium sp. CAG:221 (85.71%)
7 3737 bp 25.80 37.05 74.58
L3_129_000G1_scaffold_4770
Species: Clostridium sp. CAG:221 (57.14%)
7 8293 bp 27.03 31.33 75.75
L3_129_000G1_scaffold_9124
Species: Clostridium sp. CAG:265 (100%)
7 3918 bp 33.56 43.03 72.82
L3_129_000G1_scaffold_6044
Species: Clostridium sp. CAG:221 (57.14%)
7 6249 bp 26.45 33.49 91.41
L3_129_000G1_scaffold_11822
Order: Clostridiales (57.14%)
7 3009 bp 25.06 34.25 86.14
L3_129_000G1_scaffold_6876
Species: Clostridium sp. CAG:221 (66.67%)
6 5408 bp 27.22 29.79 70.51
L3_129_000G1_scaffold_15527
Species: Clostridium sp. CAG:221 (50%)
6 2311 bp 28.56 26.09 72.57
L3_129_000G1_scaffold_7024
Phylum: Firmicutes (50%)
6 5277 bp 28.03 6740.82 51.90
L3_129_000G1_scaffold_8909
Genus: Veillonella (83.33%)
6 4026 bp 29.88 22.32 83.61
L3_129_000G1_scaffold_3627
Species: Clostridium sp. CAG:265 (100%)
6 11629 bp 29.53 34.41 87.58
L3_129_000G1_scaffold_11693
Species: Clostridium sp. CAG:221 (80%)
5 3041 bp 26.64 43.46 86.62
L3_129_000G1_scaffold_4493
Species: Clostridium sp. CAG:265 (100%)
5 8848 bp 34.60 37.04 94.67
L3_129_000G1_scaffold_5121
Species: Clostridium sp. CAG:221 (60%)
5 7615 bp 26.79 32.13 92.30
L3_129_000G1_scaffold_7288
Species: Clostridium sp. CAG:221 (80%)
5 5075 bp 26.09 28.67 90.27
L3_129_000G1_scaffold_14461
Genus: Clostridium (100%)
5 2476 bp 30.05 14.60 100.69
L3_129_000G1_scaffold_10959
Species: Clostridium sp. CAG:221 (50%)
4 3246 bp 29.02 36.04 80.78
L3_129_000G1_scaffold_8490
Species: Clostridium sp. CAG:265 (50%)
4 4271 bp 31.07 36.03 91.88
L3_129_000G1_scaffold_6923
Species: Desulfotomaculum acetoxidans (50%)
4 5374 bp 23.41 25.96 81.34
L3_129_000G1_scaffold_24460
Species: Clostridium sp. CAG:221 (100%)
4 1515 bp 22.97 26.93 85.15
L3_129_000G1_scaffold_21119
Genus: Veillonella (50%)
4 1736 bp 29.72 23.76 75.17
L3_129_000G1_scaffold_10329
Species: Clostridium botulinum (50%)
4 3446 bp 26.78 26.81 63.20
L3_129_000G1_scaffold_14537
Species: Clostridium sp. CAG:265 (66.67%)
3 2461 bp 28.48 31.27 68.26
L3_129_000G1_scaffold_14045
Species: Clostridium sp. CAG:265 (66.67%)
3 2544 bp 36.01 42.69 90.57
L3_129_000G1_scaffold_17949
Species: Clostridium sp. CAG:221 (66.67%)
3 2012 bp 24.30 31.09 63.82
L3_129_000G1_scaffold_28198
Genus: Clostridium (66.67%)
3 1331 bp 27.42 29.75 52.29
L3_129_000G1_scaffold_19351
Genus: Clostridium (66.67%)
3 1881 bp 25.36 22.17 69.38
L3_129_000G1_scaffold_24634
Genus: Veillonella (66.67%)
3 1503 bp 30.34 25.15 89.82
Displaying items 51-100 of 126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.