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L3_129_000G1_scaffold_2122

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_2122_1
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0003167C95
hypothetical protein
L3_129_000G1_scaffold_2122_2
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

237..776
DNA (540bp) protein (180aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJM9_KOCRD
L3_129_000G1_scaffold_2122_3
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

882..1817
DNA (936bp) protein (312aa)
cysK; cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Cysteine synthase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJN0_KOCRD
L3_129_000G1_scaffold_2122_4
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2002..2586
DNA (585bp) protein (195aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Serine acetyltransferase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJN1_KOCRD
L3_129_000G1_scaffold_2122_5
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2809..4266)
DNA (1458bp) protein (486aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJN2_KOCRD
L3_129_000G1_scaffold_2122_6
unknown

Not on your lists

4845..5198
DNA (354bp) protein (118aa)

This feature has no annotations

L3_129_000G1_scaffold_2122_7
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5277..5912)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI00031A544D
Uncharacterized protein {ECO:0000313|EMBL:KHE74813.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_2122_8
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5997..6713)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI00030D1C1E
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_2122_9
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6717..8114)
DNA (1398bp) protein (466aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase n=1 Tax=Kocuria rhizophila RepID=UPI000362749E
L3_129_000G1_scaffold_2122_10
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8275..11829)
DNA (3555bp) protein (1185aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Kocuria rhizophila RepID=UPI000364266C
L3_129_000G1_scaffold_2122_11
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11879..12856)
DNA (978bp) protein (326aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Pseudouridine synthase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJN8_KOCRD
rluD; pseudouridine synthase RluD
L3_129_000G1_scaffold_2122_12
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12846..13379)
DNA (534bp) protein (178aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
peptidase A8 n=1 Tax=Kocuria rhizophila RepID=UPI00036EEC6E
L3_129_000G1_scaffold_2122_13
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13387..14154)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJP0_KOCRD
Cell division protein {ECO:0000313|EMBL:KHE74808.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_2122_14
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14314..14610)
DNA (297bp) protein (99aa)
membrane protein n=1 Tax=Kocuria rhizophila RepID=UPI00030A6118
Membrane protein {ECO:0000313|EMBL:KHE74807.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_2122_15
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14615..15139)
DNA (525bp) protein (175aa)
Cell division protein SepF n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=SEPF_KOCRD
hypothetical protein
Cell division protein SepF {ECO:0000255|HAMAP-Rule:MF_01197}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2122_16
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15203..16027)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJP3_KOCRD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG29824.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2122_17
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16020..16757)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002ED7D8C
Uncharacterized protein {ECO:0000313|EMBL:KIC70275.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_2122_18
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17036..18280)
DNA (1245bp) protein (415aa)
Cell division protein FtsZ n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=FTSZ_KOCRD
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
ftsZ; cell division protein FtsZ
L3_129_000G1_scaffold_2122_19
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18522..19622)
DNA (1101bp) protein (367aa)
Putative cell division protein FtsQ n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJP6_KOCRD
ftsQ; putative cell division protein FtsQ
Putative cell division protein FtsQ {ECO:0000313|EMBL:BAG29827.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2122_20
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19622..21028)
DNA (1407bp) protein (469aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJP7_KOCRD
L3_129_000G1_scaffold_2122_21
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21064..21720)
DNA (657bp) protein (219aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJP8_KOCRD
Displaying 21 items

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