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L3_129_000G1_scaffold_2140

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_2140_1
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
cation transporter n=1 Tax=Kocuria rhizophila RepID=UPI0002E6E090
putative cobalt-zinc-cadmium efflux protein
Putative cation efflux protein {ECO:0000313|EMBL:BAG29047.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_2
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(411..851)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002F391E2
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC67015.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
transcription regulator ArsR
L3_129_000G1_scaffold_2140_3
unknown

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1071..1328
DNA (258bp) protein (86aa)

This feature has no annotations

L3_129_000G1_scaffold_2140_4
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1338..2219)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B56649
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBT75565.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
L3_129_000G1_scaffold_2140_5
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2459..3415
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI000317AA99
Uncharacterized protein {ECO:0000313|EMBL:KIC67011.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_2140_6
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3422..4540)
DNA (1119bp) protein (373aa)
MscS family transporter n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJM2_KOCRD
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KHE73321.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
MscS family transporter
L3_129_000G1_scaffold_2140_7
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4537..5577)
DNA (1041bp) protein (347aa)
transporter n=1 Tax=Kocuria rhizophila RepID=UPI0002EEB9A4
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
CorA family transporter
L3_129_000G1_scaffold_2140_8
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5587..6168
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJM4_KOCRD
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KIC67008.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_2140_9
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6165..7223
DNA (1059bp) protein (353aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJU9_KOCRD
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAG29054.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_10
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7309..8526
DNA (1218bp) protein (406aa)
Aminotransferase {ECO:0000313|EMBL:KIC67006.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KIC67006.1};; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
aminotransferase AlaT (EC:2.6.1.2)
aminotransferase AlaT n=1 Tax=Kocuria rhizophila RepID=UPI00036B1A26
L3_129_000G1_scaffold_2140_11
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8540..8848)
DNA (309bp) protein (103aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV1_KOCRD
L3_129_000G1_scaffold_2140_12
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8929..10221)
DNA (1293bp) protein (431aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV2_KOCRD
L3_129_000G1_scaffold_2140_13
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10313..11206
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002FB9909
Uncharacterized protein {ECO:0000313|EMBL:KIC67003.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_2140_14
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11199..12272
DNA (1074bp) protein (358aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Kocuria rhizophila RepID=UPI00036EF9C0
L3_129_000G1_scaffold_2140_15
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12279..13466)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV5_KOCRD
RmuC family protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG29060.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_16
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13552..14163)
DNA (612bp) protein (204aa)
Putative NarL family two-component response regulator n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV6_KOCRD
NarL family two-component response regulator
Putative NarL family two-component response regulator {ECO:0000313|EMBL:BAG29061.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_17
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14160..15500)
DNA (1341bp) protein (447aa)
two-component histidine kinase (EC:2.7.3.-)
Putative two-component histidine kinase {ECO:0000313|EMBL:BAG29062.1}; EC=2.7.13.- {ECO:0000313|EMBL:BAG29062.1};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Putative two-component histidine kinase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV7_KOCRD
L3_129_000G1_scaffold_2140_18
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15497..16258)
DNA (762bp) protein (254aa)
Hypothetical membrane protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV8_KOCRD
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAG29063.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_19
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16365..17291)
DNA (927bp) protein (309aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJV9_KOCRD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC65697.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
putative ABC transporter ATP-binding protein
L3_129_000G1_scaffold_2140_20
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17428..18513
DNA (1086bp) protein (362aa)
Ribosome-binding ATPase YchF n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GJW0_KOCRD
GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_2140_21
Acinetobacter tandoii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19248..20135
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K9M4_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EOR10001.1}; TaxID=1120927 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter tandoii DSM 14970 = CIP 107469.;"
hypothetical protein
L3_129_000G1_scaffold_2140_22
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20132..20758
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q0G7_STANL
Uncharacterized protein {ECO:0000313|EMBL:KJF16620.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
L3_129_000G1_scaffold_2140_23
unknown

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21108..21281
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 23 items

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