ggKbase home page

L3_129_000G1_scaffold_1907

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_1907_1
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..631)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG66_KOCRD
NADH-ubiquinone oxidoreductase {ECO:0000313|EMBL:KHE75558.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_1907_2
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(701..2677)
DNA (1977bp) protein (659aa)
Hypothetical membrane protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG67_KOCRD
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAG30268.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_1907_3
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2677..3201)
DNA (525bp) protein (175aa)
membrane protein n=1 Tax=Kocuria rhizophila RepID=UPI0002E279B2
Membrane protein {ECO:0000313|EMBL:KIC69856.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_1907_4
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3185..3739)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002FFDC4E
Uncharacterized protein {ECO:0000313|EMBL:KHE75560.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_1907_5
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3727..4260)
DNA (534bp) protein (178aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG70_KOCRD
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KHE75561.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
L3_129_000G1_scaffold_1907_6
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4260..4688)
DNA (429bp) protein (143aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase {ECO:0000313|EMBL:BAG30272.1}; EC=4.1.2.25 {ECO:0000313|EMBL:BAG30272.1};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Dihydroneopterin aldolase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG71_KOCRD
L3_129_000G1_scaffold_1907_7
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4696..5652)
DNA (957bp) protein (319aa)
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:BAG30273.1}; EC=2.5.1.15 {ECO:0000313|EMBL:BAG30273.1};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Dihydropteroate synthase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG72_KOCRD
L3_129_000G1_scaffold_1907_8
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5649..6305)
DNA (657bp) protein (219aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase n=1 Tax=Kocuria rhizophila RepID=UPI0002DFEFDB
L3_129_000G1_scaffold_1907_9
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6306..8450)
DNA (2145bp) protein (715aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
ftsH; cell division protein FtsH (EC:3.4.24.-)
cell division protein FtsH n=1 Tax=Kocuria rhizophila RepID=UPI0002F3647B
L3_129_000G1_scaffold_1907_10
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8811..9362)
DNA (552bp) protein (184aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG75_KOCRD
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KHE75564.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
L3_129_000G1_scaffold_1907_11
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9359..10462)
DNA (1104bp) protein (368aa)
tilS; putative tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG76_KOCRD
L3_129_000G1_scaffold_1907_12
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10574..10966)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG77_KOCRD
DNA-binding protein {ECO:0000313|EMBL:KHE75599.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_1907_13
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11085..12182)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG78_KOCRD
Hydrolase {ECO:0000313|EMBL:KHE75566.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_1907_14
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12457..13911)
DNA (1455bp) protein (485aa)
putative D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0003674D36
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KHE75567.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
L3_129_000G1_scaffold_1907_15
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14181..14696
DNA (516bp) protein (172aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Inorganic pyrophosphatase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GGG5_KOCRD
L3_129_000G1_scaffold_1907_16
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14875..15651
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002F369B7
Uncharacterized protein {ECO:0000313|EMBL:KIC69844.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_1907_17
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15658..16314)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002D9F1E4
Uncharacterized protein {ECO:0000313|EMBL:KIC69843.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_1907_18
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16504..17427)
DNA (924bp) protein (308aa)
HAD family hydrolase n=1 Tax=Kocuria rhizophila RepID=UPI0003681FC3
HAD family hydrolase {ECO:0000313|EMBL:KIC69842.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_1907_19
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17595..18899)
DNA (1305bp) protein (435aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Serine--tRNA ligase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=SYS_KOCRD
L3_129_000G1_scaffold_1907_20
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19006..19947
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI00037594CB
Diacylglycerol kinase {ECO:0000313|EMBL:KIC69840.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
L3_129_000G1_scaffold_1907_21
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20097..21491)
DNA (1395bp) protein (465aa)
Putative gluconate permease n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GGH1_KOCRD
putative gluconate permease
Putative gluconate permease {ECO:0000313|EMBL:BAG30287.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
L3_129_000G1_scaffold_1907_22
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21497..22498)
DNA (1002bp) protein (334aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
pheA; prephenate dehydratase (EC:4.2.1.51)
prephenate dehydratase n=1 Tax=Kocuria rhizophila RepID=UPI0002D32053
L3_129_000G1_scaffold_1907_23
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22495..22830)
DNA (336bp) protein (112aa)
sulfurtransferase n=1 Tax=Kocuria rhizophila RepID=UPI0002E0142E
Sulfurtransferase {ECO:0000313|EMBL:KHE75576.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
L3_129_000G1_scaffold_1907_24
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22972..23970)
DNA (999bp) protein (333aa)
Putative L-asparagine permease n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GGH4_KOCRD
putative L-asparagine permease
Putative L-asparagine permease {ECO:0000313|EMBL:BAG30290.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Displaying 24 items

View Taxonomy