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L3_129_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_50_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K9V0_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDP20502.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_129_000M1_scaffold_50_2
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

179..1387
DNA (1209bp) protein (403aa)
aminotransferase, class I/II (EC:4.4.1.8)
Aminotransferase class I/II n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWI9_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDE31490.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_129_000M1_scaffold_50_3
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1492..2850
DNA (1359bp) protein (453aa)
dipeptidase, putative (EC:3.5.1.18)
Dipeptidase putative n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZV4_9FIRM
Dipeptidase putative {ECO:0000313|EMBL:CDE31487.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_129_000M1_scaffold_50_4
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2871..3284
DNA (414bp) protein (138aa)
Oxidoreductase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWI4_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDE31485.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
C_GCAxxG_C_C family probable redox protein
L3_129_000M1_scaffold_50_5
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3541..5658)
DNA (2118bp) protein (706aa)
Alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWL1_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDE31481.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Alpha-galactosidase
L3_129_000M1_scaffold_50_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5919..6866
DNA (948bp) protein (316aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNZ9_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL21560.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_50_7
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7047..9122)
DNA (2076bp) protein (692aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWH4_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDE31475.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L3_129_000M1_scaffold_50_8
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9137..9478)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE31472.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_50_9
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9738..10196)
DNA (459bp) protein (153aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3U1_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDE31470.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Fe2+/Zn2+ uptake regulation proteins
L3_129_000M1_scaffold_50_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10528..11643
DNA (1116bp) protein (372aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Clostridiales RepID=D4LP03_9FIRM
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI90472.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_129_000M1_scaffold_50_11
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11748..12836
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LP04_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21565.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_50_12
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12921..13970)
DNA (1050bp) protein (350aa)
ABC transporter, ATP-binding protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D0Z6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI90470.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ABC-type sulfate/molybdate transport systems, ATPase component
L3_129_000M1_scaffold_50_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13970..14665)
DNA (696bp) protein (232aa)
Molybdate ABC transporter, permease protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LP06_9FIRM
molybdate ABC transporter, permease protein
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:CBL21567.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_50_14
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14733..15635)
DNA (903bp) protein (301aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LP07_9FIRM
molybdenum ABC transporter, periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:CBL21568.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_50_15
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15948..16160
DNA (213bp) protein (71aa)
Molybdopterin-binding protein n=3 Tax=Clostridiales RepID=D4LP08_9FIRM
Molybdopterin-binding protein
Molybdopterin-binding protein {ECO:0000313|EMBL:CDE32394.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_129_000M1_scaffold_50_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16153..17073
DNA (921bp) protein (307aa)
DNA binding domain excisionase family n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZ69_9FIRM
DNA binding domain excisionase family {ECO:0000313|EMBL:CDE32395.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
DNA binding domain, excisionase family
L3_129_000M1_scaffold_50_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17213..18787)
DNA (1575bp) protein (525aa)
Cell wall-binding repeat protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CIX5_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:ERI90464.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Beta-lactamase class A
L3_129_000M1_scaffold_50_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18840..19916)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H2G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32397.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_50_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19932..22700)
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H080_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32398.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_50_20
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22724..24388)
DNA (1665bp) protein (555aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GYB2_9FIRM
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CDE32399.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_129_000M1_scaffold_50_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24403..25599)
DNA (1197bp) protein (399aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=2 Tax=Clostridiales RepID=U2D0Y8_9FIRM
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CDE32400.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_129_000M1_scaffold_50_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25627..26550)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32401.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_50_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26575..27477)
DNA (903bp) protein (301aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Blautia sp. KLE 1732 RepID=U2D2A2_9FIRM
L3_129_000M1_scaffold_50_24
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27608..30823)
DNA (3216bp) protein (1072aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR91_9FIRM
L3_129_000M1_scaffold_50_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30823..31899)
DNA (1077bp) protein (359aa)
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Carbamoyl-phosphate synthase small chain n=3 Tax=Clostridiales RepID=D4LP16_9FIRM
L3_129_000M1_scaffold_50_26
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32288..32755)
DNA (468bp) protein (156aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQ53_9FIRM
peptidase A8 signal peptidase II
L3_129_000M1_scaffold_50_27
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32837..33550)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GS41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29568.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_50_28
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33593..34978)
DNA (1386bp) protein (462aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=2 Tax=Clostridiales RepID=U2D297_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|SAAS:SAAS00063387}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_129_000M1_scaffold_50_29
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35115..36680)
DNA (1566bp) protein (522aa)
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR87_9FIRM
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CDE29566.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_129_000M1_scaffold_50_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36831..37760)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29565.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Glycosyltransferases, probably involved in cell wall biogenesis
Displaying items 1-30 of 93 in total

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