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L3_129_000M1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_74_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..443)
DNA (441bp) protein (147aa)
Site-determining protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3U1_9FIRM
Site-determining protein {ECO:0000313|EMBL:CDC74766.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
septum site-determining protein MinD
L3_129_000M1_scaffold_74_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(457..3279)
DNA (2823bp) protein (941aa)
Peptidoglycan glycosyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA45_EUBR3
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACR75486.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
peptidoglycan glycosyltransferase
L3_129_000M1_scaffold_74_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3269..3790)
DNA (522bp) protein (174aa)
Rod shape-determining protein MreD n=2 Tax=Eubacterium rectale RepID=D4JGH3_9FIRM
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:CBK94572.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_000M1_scaffold_74_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3799..4749)
DNA (951bp) protein (317aa)
Cell shape-determining protein MreC n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMU7_9FIRM
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_129_000M1_scaffold_74_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4764..5768)
DNA (1005bp) protein (335aa)
Actin-like ATPase involved in cell morphogenesis n=2 Tax=Eubacterium rectale RepID=D4JGH5_9FIRM
Actin-like ATPase involved in cell morphogenesis
Actin-like ATPase involved in cell morphogenesis {ECO:0000313|EMBL:CBK90434.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_74_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5792..6481)
DNA (690bp) protein (230aa)
DNA replication and repair protein RadC n=2 Tax=Eubacterium RepID=D4JGH6_9FIRM
DNA replication and repair protein RadC
DNA replication and repair protein RadC {ECO:0000313|EMBL:CBK94575.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_000M1_scaffold_74_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6552..7850)
DNA (1299bp) protein (433aa)
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA50_EUBR3
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:ACR75491.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_74_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7844..8830)
DNA (987bp) protein (329aa)
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
tRNA dimethylallyltransferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGH7_9FIRM
L3_129_000M1_scaffold_74_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8827..10683)
DNA (1857bp) protein (619aa)
DNA mismatch repair protein MutL n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4U7_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA mismatch repair protein MutL
L3_129_000M1_scaffold_74_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10695..13337)
DNA (2643bp) protein (881aa)
DNA mismatch repair protein MutS n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3S6_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
DNA mismatch repair protein MutS
L3_129_000M1_scaffold_74_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13387..15006)
DNA (1620bp) protein (540aa)
Uncharacterized FAD-dependent dehydrogenases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGH9_9FIRM
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CBK94578.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uncharacterized FAD-dependent dehydrogenases
L3_129_000M1_scaffold_74_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15007..16281)
DNA (1275bp) protein (425aa)
Predicted flavoproteins n=2 Tax=Eubacterium rectale RepID=D4JGI0_9FIRM
Predicted flavoproteins
Predicted flavoproteins {ECO:0000313|EMBL:CBK90439.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_74_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16312..16686)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=3 Tax=Eubacterium rectale RepID=C4ZA56_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75497.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_74_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16736..18400)
DNA (1665bp) protein (555aa)
Stage V sporulation protein B, putative n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA57_EUBR3
Stage V sporulation protein B, putative {ECO:0000313|EMBL:ACR75498.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
stage V sporulation protein B, putative
L3_129_000M1_scaffold_74_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18441..18938)
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Endoribonuclease YbeY n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3R8_9FIRM
hypothetical protein
L3_129_000M1_scaffold_74_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18935..19933)
DNA (999bp) protein (333aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4V3_9FIRM
Phosphate starvation-inducible protein PhoH, predicted ATPase
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:CBK90443.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_74_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19998..20525)
DNA (528bp) protein (176aa)
Putative stage IV sporulation protein YqfD n=2 Tax=Eubacterium rectale RepID=D4JGI5_9FIRM
Putative stage IV sporulation protein YqfD.
Putative stage IV sporulation protein YqfD {ECO:0000313|EMBL:CBK90444.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_74_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20515..20775)
DNA (261bp) protein (87aa)
YabP family n=4 Tax=Eubacterium RepID=D4JGI6_9FIRM
YabP family.
Uncharacterized protein {ECO:0000313|EMBL:ACR75504.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_74_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20813..21292)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Eubacterium RepID=C4ZA64_EUBR3
hypothetical protein
L3_129_000M1_scaffold_74_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21339..21830
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4V7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90447.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_74_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21872..22450
DNA (579bp) protein (193aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Xanthine phosphoribosyltransferase n=3 Tax=Eubacterium RepID=XPT_EUBR3
L3_129_000M1_scaffold_74_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22585..27162)
DNA (4578bp) protein (1526aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
DNA polymerase III polC-type n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA67_EUBR3
DNA polymerase III, alpha subunit
L3_129_000M1_scaffold_74_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27165..28211)
DNA (1047bp) protein (349aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGJ0_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_129_000M1_scaffold_74_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28238..29284)
DNA (1047bp) protein (349aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Predicted membrane-associated Zn-dependent protease n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMR1_9FIRM
putative membrane-associated Zn-dependent protease
L3_129_000M1_scaffold_74_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29287..30429)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UVH7_9FIRM
L3_129_000M1_scaffold_74_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30515..31318)
DNA (804bp) protein (268aa)
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphatidate cytidylyltransferase n=3 Tax=Eubacterium RepID=C4ZA71_EUBR3
L3_129_000M1_scaffold_74_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31318..32043)
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Isoprenyl transferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TRA6_9FIRM
UDP diphosphate synthase
L3_129_000M1_scaffold_74_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32199..32753)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=3 Tax=Eubacterium rectale RepID=RRF_EUBR3
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_74_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32787..33482)
DNA (696bp) protein (232aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uridylate kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGJ5_9FIRM
L3_129_000M1_scaffold_74_30
unknown

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comp(33496..33588)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying items 1-30 of 82 in total

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