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L3_129_000M1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_126_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1059
DNA (1059bp) protein (353aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBK94540.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK94540.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
DNA polymerase III, delta subunit n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLP3_9FIRM
L3_129_000M1_scaffold_126_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1144..1407)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TV31_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
rpsT; 30S ribosomal protein S20
L3_129_000M1_scaffold_126_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1588..2499
DNA (912bp) protein (304aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Germination protease n=2 Tax=Eubacterium RepID=C4Z9E1_EUBR3
germination protease
L3_129_000M1_scaffold_126_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2571..3668
DNA (1098bp) protein (366aa)
Stage II sporulation protein P n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4H2_9FIRM
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:CBK90312.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_126_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3732..5543
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Elongation factor 4 n=4 Tax=Eubacterium RepID=LEPA_EUBR3
GTP-binding protein LepA
L3_129_000M1_scaffold_126_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5552..6745
DNA (1194bp) protein (398aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CBK94537.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBK94537.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLP0_9FIRM
L3_129_000M1_scaffold_126_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6759..7508
DNA (750bp) protein (250aa)
Segregation and condensation protein A n=2 Tax=Eubacterium RepID=C4Z9E5_EUBR3
segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7526..8089
DNA (564bp) protein (188aa)
Segregation and condensation protein B n=4 Tax=Eubacterium RepID=SCPB_EUBR3
putative transcriptional regulator
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_000M1_scaffold_126_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8171..9382
DNA (1212bp) protein (404aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9E7_EUBR3
serine-type D-Ala-D-Ala carboxypeptidase
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ACR75369.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9490..10926
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=3 Tax=Eubacterium RepID=D4JLN6_9FIRM
Acetyl-CoA carboxylase carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:CDC73700.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_129_000M1_scaffold_126_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10946..11770
DNA (825bp) protein (275aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Eubacterium rectale CAG:36 RepID=R6USK0_9FIRM
hypothetical protein
L3_129_000M1_scaffold_126_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11789..12151
DNA (363bp) protein (121aa)
Pyruvate carboxylase subunit B n=2 Tax=Eubacterium RepID=C4Z9F0_EUBR3
pyruvate carboxylase subunit B
Pyruvate carboxylase subunit B {ECO:0000313|EMBL:CDC73704.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_129_000M1_scaffold_126_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12171..13319
DNA (1149bp) protein (383aa)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4D7_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDC73706.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
sodium ion-translocating decarboxylase, beta subunit
L3_129_000M1_scaffold_126_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13342..14760
DNA (1419bp) protein (473aa)
Oxaloacetate decarboxylase n=4 Tax=Eubacterium RepID=C4Z9F2_EUBR3
oxaloacetate decarboxylase
Oxaloacetate decarboxylase {ECO:0000313|EMBL:ACR75374.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15000..15929
DNA (930bp) protein (310aa)
Transcriptional regulators n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4I4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK90324.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_126_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15922..17205
DNA (1284bp) protein (428aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9F7_EUBR3
NAD(FAD)-utilizing dehydrogenase
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:ACR75379.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17319..17981
DNA (663bp) protein (221aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Cytidylate kinase n=3 Tax=Eubacterium rectale RepID=C4Z9F8_EUBR3
L3_129_000M1_scaffold_126_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17985..18845
DNA (861bp) protein (287aa)
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=3 Tax=Eubacterium RepID=C4Z9F9_EUBR3
L3_129_000M1_scaffold_126_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18826..19941
DNA (1116bp) protein (372aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein n=4 Tax=Eubacterium RepID=C4Z9G0_EUBR3
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein {ECO:0000313|EMBL:ACR75382.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20038..21135)
DNA (1098bp) protein (366aa)
Possible elongation subunit of DNA-dependent DNA polymerase n=2 Tax=Eubacterium rectale RepID=C4Z9G2_EUBR3
DNA polymerase family B, exonuclease domain.
Possible elongation subunit of DNA-dependent DNA polymerase {ECO:0000313|EMBL:ACR75384.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21301..22632
DNA (1332bp) protein (444aa)
Electron transport complex protein RnfC n=2 Tax=Eubacterium rectale RepID=C4Z9G3_EUBR3
rnfC/nqrF
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_22
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22651..23613
DNA (963bp) protein (321aa)
NADH:ubiquinone oxidoreductase Na translocating B subunit n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U0R7_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
NADH:ubiquinone oxidoreductase, Na translocating, B subunit
L3_129_000M1_scaffold_126_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23606..24214
DNA (609bp) protein (203aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLM3_9FIRM
electron transport complex, RnfABCDGE type, G subunit
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_000M1_scaffold_126_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24214..24942
DNA (729bp) protein (243aa)
RnfE/nqrD n=3 Tax=Eubacterium RepID=C4Z9G6_EUBR3
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24942..25532
DNA (591bp) protein (197aa)
Na(+)-translocating NADH-quinone reductase subunit D n=4 Tax=Eubacterium RepID=C4Z9G7_EUBR3
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_000M1_scaffold_126_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25551..26342
DNA (792bp) protein (264aa)
Ferredoxin n=4 Tax=Eubacterium RepID=C4Z9G8_EUBR3
ferredoxin
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:CBK90335.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_000M1_scaffold_126_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26401..27450)
DNA (1050bp) protein (350aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9G9_EUBR3
thiamine biosynthesis lipoprotein
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:ACR75391.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_129_000M1_scaffold_126_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27618..28517
DNA (900bp) protein (300aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Glutamate 5-kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9H0_EUBR3
glutamate 5-kinase
L3_129_000M1_scaffold_126_29
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28549..28773
DNA (225bp) protein (75aa)
UPF0291 protein EUBREC_1649 n=4 Tax=Eubacterium RepID=C4Z9H1_EUBR3
hypothetical protein
UPF0291 protein BN626_01293 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_129_000M1_scaffold_126_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28748..29323
DNA (576bp) protein (192aa)
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBK90339.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
5,10-methenyltetrahydrofolate synthetase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4J9_9FIRM
Displaying items 1-30 of 86 in total

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