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L3_129_000M1_scaffold_129

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Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_129_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(307..1188)
DNA (882bp) protein (294aa)
Integral membrane protein DUF6 n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VII8_9FIRM
Integral membrane protein DUF6 {ECO:0000313|EMBL:EFV17273.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_129_000M1_scaffold_129_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1355..3445)
DNA (2091bp) protein (697aa)
PTS system glucose subfamily IIA component n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZF93_9FIRM
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDA32806.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system, glucose subfamily, IIA component
L3_129_000M1_scaffold_129_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3504..4439)
DNA (936bp) protein (312aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZUP4_9FIRM
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:CDA32807.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_129_000M1_scaffold_129_4
unknown

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comp(4483..4869)
DNA (387bp) protein (129aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Clostridiales RepID=D4N1G6_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL38711.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_129_000M1_scaffold_129_5
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5037..5951)
DNA (915bp) protein (305aa)
PTS system, mannose/fructose/sorbose family, IID component n=3 Tax=Lachnospiraceae RepID=L1QD36_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDA32809.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system IID component, Man family (TC 4.A.6)
L3_129_000M1_scaffold_129_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5972..6769)
DNA (798bp) protein (266aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=6 Tax=Firmicutes RepID=D4N1G4_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA32810.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_129_000M1_scaffold_129_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6802..7785)
DNA (984bp) protein (328aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB n=5 Tax=Clostridiales RepID=D4N1G3_9FIRM
Putative PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:EKY25510.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_129_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8010..8840)
DNA (831bp) protein (277aa)
Transcription antiterminator LicT n=2 Tax=Clostridiales RepID=B0NWW8_9CLOT
Putative transcription antiterminator LicT {ECO:0000313|EMBL:EKY25508.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
licT; transcription antiterminator LicT
L3_129_000M1_scaffold_129_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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9257..10126
DNA (870bp) protein (290aa)
Ribonuclease BN-like family protein n=3 Tax=Lachnospiraceae RepID=E5VIJ7_9FIRM
YihY family protein {ECO:0000313|EMBL:EKY25507.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted membrane protein
L3_129_000M1_scaffold_129_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10162..11382)
DNA (1221bp) protein (407aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
6-phosphofructokinase n=5 Tax=Clostridiales RepID=D4N1G1_9FIRM
L3_129_000M1_scaffold_129_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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11601..13373
DNA (1773bp) protein (591aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase, M24 family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QCT9_9FIRM
Peptidase, M24 family {ECO:0000313|EMBL:EKY25505.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_129_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13454..14392)
DNA (939bp) protein (313aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=3 Tax=Clostridiales RepID=D4N1F9_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EKY25503.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_129_000M1_scaffold_129_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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14430..15206
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=4 Tax=Clostridiales RepID=D4N1F8_9FIRM
RNA polymerase, sigma subunit, RpsG/SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_129_000M1_scaffold_129_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15219..16166)
DNA (948bp) protein (316aa)
Mg2+ and Co2+ transporters n=4 Tax=Clostridiales RepID=D4N1F7_9FIRM
Mg2+ and Co2+ transporters
CorA-like protein {ECO:0000313|EMBL:EKY25502.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_129_15
unknown

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comp(16294..17259)
DNA (966bp) protein (322aa)
Predicted dehydrogenases and related proteins n=2 Tax=Clostridiales RepID=D4N1F6_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL38701.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_129_000M1_scaffold_129_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17278..17895)
DNA (618bp) protein (206aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Ribose 5-phosphate isomerase A n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWW0_9CLOT
ribose 5-phosphate isomerase
L3_129_000M1_scaffold_129_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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18033..18356
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit delta domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QC09_9FIRM
DNA-directed RNA polymerase subunit delta domain protein {ECO:0000313|EMBL:EKY25499.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_129_000M1_scaffold_129_18
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18417..19928)
DNA (1512bp) protein (504aa)
Fibronectin type III domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIK7_9FIRM
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:EFV17292.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Fibronectin type III domain.
L3_129_000M1_scaffold_129_19
unknown

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comp(19991..20872)
DNA (882bp) protein (294aa)
33 kDa chaperonin n=5 Tax=Clostridiales RepID=D4N1F3_9FIRM
Disulfide bond chaperones of the HSP33 family
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_129_000M1_scaffold_129_20
unknown

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comp(20884..21618)
DNA (735bp) protein (245aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=2 Tax=Clostridiales RepID=D4N1F2_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CBL38697.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_129_000M1_scaffold_129_21
unknown

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comp(21628..23190)
DNA (1563bp) protein (521aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes {ECO:0000313|EMBL:CBL38696.1}; EC=2.7.8.- {ECO:0000313|EMBL:CBL38696.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes n=4 Tax=Clostridiales RepID=D4N1F1_9FIRM
L3_129_000M1_scaffold_129_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23260..23817)
DNA (558bp) protein (186aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Thiamine monophosphate synthase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZFA9_9FIRM
Thiamine monophosphate synthase {ECO:0000313|EMBL:CDA32826.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_129_000M1_scaffold_129_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23819..24037)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIL2_9FIRM
Small, acid-soluble spore proteins, alpha/beta type.
Uncharacterized protein {ECO:0000313|EMBL:EFV17297.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_129_000M1_scaffold_129_24
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24097..27663)
DNA (3567bp) protein (1189aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YZH9_9FIRM
recombination helicase AddA, Firmicutes type
L3_129_000M1_scaffold_129_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27629..31009)
DNA (3381bp) protein (1127aa)
ATP-dependent nuclease subunit B n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIL6_9FIRM
Putative ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EKY25491.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ATP-dependent nuclease, subunit B
L3_129_000M1_scaffold_129_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31098..31529
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5Z1E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17302.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_129_000M1_scaffold_129_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31548..32033)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17303.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_129_000M1_scaffold_129_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32147..32809)
DNA (663bp) protein (221aa)
ABC-type metal ion transport system, permease component n=4 Tax=Clostridiales RepID=D4N1E4_9FIRM
ABC-type metal ion transport system, permease component
ABC transporter, permease protein {ECO:0000313|EMBL:EKY25488.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_129_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32811..33821)
DNA (1011bp) protein (337aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ABC-type metal ion transport system, ATPase component n=5 Tax=Clostridiales RepID=D4N1E3_9FIRM
ABC-type metal ion transport system, ATPase component
L3_129_000M1_scaffold_129_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34019..34861)
DNA (843bp) protein (281aa)
Lipoprotein n=4 Tax=Clostridiales RepID=D4N1E2_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying items 1-30 of 105 in total

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