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L3_129_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_156_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..1316)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40743.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Alanyl-tRNA synthetase, class IIc-like protein
L3_129_000M1_scaffold_156_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1521..1754
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40741.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1804..1947)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40740.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_129_000M1_scaffold_156_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2073..2498
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40739.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2512..2799
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40737.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3062..4432
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40729.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid carrier protein
L3_129_000M1_scaffold_156_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4530..5318)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40727.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5527..7941)
DNA (2415bp) protein (805aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF50_9CLOT
L3_129_000M1_scaffold_156_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8281..8628)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40723.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8914..10224
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40721.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10225..11382)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40719.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000M1_scaffold_156_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11589..12497
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40718.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L3_129_000M1_scaffold_156_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12562..13560)
DNA (999bp) protein (333aa)
Isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase NAD-dependent n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF42_9CLOT
Isocitrate dehydrogenase NAD-dependent {ECO:0000313|EMBL:CCY40715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_129_000M1_scaffold_156_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13563..14903)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK66_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
citrate (Si)-synthase
L3_129_000M1_scaffold_156_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14958..17270)
DNA (2313bp) protein (771aa)
Aconitase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV97_9CLOT
Aconitase A {ECO:0000313|EMBL:CCY40712.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aconitate hydratase
L3_129_000M1_scaffold_156_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17586..18698)
DNA (1113bp) protein (371aa)
putative alpha-ribazole-5'-phosphate phosphatase (EC:3.1.3.73)
HDIG domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP73_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EEQ59953.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_129_000M1_scaffold_156_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18710..19339)
DNA (630bp) protein (210aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP72_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEQ59952.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Uncharacterized MobA-related protein
L3_129_000M1_scaffold_156_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19355..20221)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57374.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_129_000M1_scaffold_156_19
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(20232..20909)
DNA (678bp) protein (226aa)
putative molybdenum cofactor biosynthesis protein A, archaeal (EC:4.1.99.18)
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=MOAA_ARCFU
Tax=RBG_13_Actinobacteria_55_18_curated
L3_129_000M1_scaffold_156_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20912..23266)
DNA (2355bp) protein (785aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00562.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
putative xanthine dehydrogenase FAD-binding subunit
L3_129_000M1_scaffold_156_21
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23263..25605)
DNA (2343bp) protein (781aa)
xdhA1; xanthine dehydrogenase molybdopterin binding protein (EC:1.17.1.4)
Xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:AFA47971.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AFA47971.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDJ9_ACEWD
L3_129_000M1_scaffold_156_22
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25602..26129)
DNA (528bp) protein (176aa)
Putative xanthine dehydrogenase iron-sulfur binding subunit XdhC n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDJ8_ACEWD
xdhC; putative xanthine dehydrogenase iron-sulfur binding subunit XdhC
Putative xanthine dehydrogenase iron-sulfur binding subunit XdhC {ECO:0000313|EMBL:AFA47970.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_129_000M1_scaffold_156_23
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26278..27180
DNA (903bp) protein (301aa)
Transcriptional regulator LysR family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDJ5_ACEWD
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:AFA47967.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_129_000M1_scaffold_156_24
unknown

Not on your lists

27211..27597
DNA (387bp) protein (129aa)

This feature has no annotations

L3_129_000M1_scaffold_156_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27610..28020)
DNA (411bp) protein (137aa)
Response regulator receiver domain protein n=2 Tax=Dorea RepID=A6BDJ6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM64513.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
vicR; response regulator protein
L3_129_000M1_scaffold_156_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28588..30681)
DNA (2094bp) protein (698aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor G n=8 Tax=Clostridium RepID=N9WNR5_9CLOT
Translation elongation factor G {ECO:0000313|EMBL:ENZ13120.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_129_000M1_scaffold_156_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30988..33492
DNA (2505bp) protein (835aa)
Excinuclease ATPase subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV88_9CLOT
Excinuclease ATPase subunit {ECO:0000313|EMBL:CCY40702.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Excinuclease ATPase subunit
L3_129_000M1_scaffold_156_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33659..34681
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40701.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
L3_129_000M1_scaffold_156_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34938..36089
DNA (1152bp) protein (384aa)
prephenate dehydrogenase (EC:1.3.1.12)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40700.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_129_000M1_scaffold_156_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36113..37387
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK53_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
Displaying items 1-30 of 58 in total

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