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L3_129_000M1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_229_1
Prevotella sp. P5-119, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

174..455
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RJS9_9BACE
Contig93, whole genome shotgun sequence {ECO:0000313|EMBL:KIP59607.1}; TaxID=1602171 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. P5-119.;"
hypothetical protein
L3_129_000M1_scaffold_229_2
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(549..2009)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Prevotella amnii CRIS 21A-A RepID=E1GWU3_9BACT
Transposase {ECO:0000313|EMBL:GAE18869.1}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
transposase
L3_129_000M1_scaffold_229_3
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2293..5013)
DNA (2721bp) protein (907aa)
ppdK; pyruvate,phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XHV4_9BACE
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EIY49667.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
L3_129_000M1_scaffold_229_4
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5265..6629
DNA (1365bp) protein (455aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQ84_9BACE
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOA58764.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
RNA methyltransferase
L3_129_000M1_scaffold_229_5
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6640..7566
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
23S rRNA/1915/1917 synthase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RU24_9BACE
RNA pseudouridylate synthase
L3_129_000M1_scaffold_229_6
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7744..8145)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XFL4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58952.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_7
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8156..8575)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9S262_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58951.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_8
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8690..10330
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RR84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58950.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
Fe-S oxidoreductase
L3_129_000M1_scaffold_229_9
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10355..12142)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQT6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58949.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
glycoside hydrolase
L3_129_000M1_scaffold_229_10
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12457..13311
DNA (855bp) protein (285aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RUP7_9BACE
L3_129_000M1_scaffold_229_11
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13315..14547
DNA (1233bp) protein (411aa)
DNA recombination protein RmuC n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RSF3_9BACE
DNA recombination protein RmuC {ECO:0000313|EMBL:EOA58947.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_12
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14870..16183)
DNA (1314bp) protein (438aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bacteroides RepID=I9S267_9BACE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative Na+/H+ antiporter
L3_129_000M1_scaffold_229_13
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16227..17405)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XHW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY49677.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
putative transport-related membrane protein
L3_129_000M1_scaffold_229_14
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17538..19319)
DNA (1782bp) protein (594aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
Elongation factor 4 n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQT2_9BACE
putative GTP-binding protein
L3_129_000M1_scaffold_229_15
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19468..19593)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RUP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58943.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
L3_129_000M1_scaffold_229_16
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19887..20087)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XFM4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY49680.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
hypothetical protein
L3_129_000M1_scaffold_229_17
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20243..20701)
DNA (459bp) protein (153aa)
C_GCAxxG_C_C family protein n=2 Tax=Bacteroides RepID=I9S271_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58941.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_18
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20777..21184
DNA (408bp) protein (136aa)
Secondary thiamine-phosphate synthase enzyme n=2 Tax=Bacteroides RepID=I8XHW9_9BACE
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EIY49682.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
hypothetical protein
L3_129_000M1_scaffold_229_19
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21190..21954)
DNA (765bp) protein (255aa)
exoA; exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQS8_9BACE
Exodeoxyribonuclease III {ECO:0000313|EMBL:EOA58939.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
L3_129_000M1_scaffold_229_20
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22009..22881)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RUN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58938.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
AraC family transcriptional regulator
L3_129_000M1_scaffold_229_21
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22957..24210)
DNA (1254bp) protein (418aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=2 Tax=Bacteroides RepID=I8XFN0_9BACE
Manganese transporter {ECO:0000313|EMBL:EOA58937.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative manganese transport-related membrane protein
L3_129_000M1_scaffold_229_22
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24405..24797
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9S274_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58936.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative lipoprotein
L3_129_000M1_scaffold_229_23
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24876..25121)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RR70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58935.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_24
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25121..25855)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein HMPREF1068_02784 n=2 Tax=Bacteroides RepID=I9S364_9BACE
Probable transcriptional regulatory protein HMPREF1214_01859 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_129_000M1_scaffold_229_25
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(25907..28369)
DNA (2463bp) protein (821aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RUN3_9BACE
putative phenylalanyl-tRNA synthetase beta chain
L3_129_000M1_scaffold_229_26
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28459..32514)
DNA (4056bp) protein (1352aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XFN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY49690.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
two-component system sensor histidine kinase/response
L3_129_000M1_scaffold_229_27
unknown

Not on your lists

comp(32966..34150)
DNA (1185bp) protein (395aa)

This feature has no annotations

L3_129_000M1_scaffold_229_28
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34186..37308)
DNA (3123bp) protein (1041aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I8R5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38468.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
lyase
L3_129_000M1_scaffold_229_29
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37314..40409)
DNA (3096bp) protein (1032aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H5M2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93461.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycoside hydrolase
L3_129_000M1_scaffold_229_30
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40421..42850)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9S279_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY49691.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
alpha-L-fucosidase
Displaying items 1-30 of 36 in total

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