ggKbase home page

L3_129_000M1_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_270_1
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=4 Tax=Bacteroides RepID=C3R0T4_9BACE
L3_129_000M1_scaffold_270_2
unknown

Not on your lists

comp(441..533)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_129_000M1_scaffold_270_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(560..1051)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor RpoD n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K048_9BACE
Putative rNA polymerase sigma factor RpoD {ECO:0000313|EMBL:KDS18971.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
L3_129_000M1_scaffold_270_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1163..1465)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS13600.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_129_000M1_scaffold_270_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1467..2333)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS13599.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
histidine kinase
L3_129_000M1_scaffold_270_6
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4048..4299)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27504.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_7
unknown

Not on your lists

comp(4736..4840)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_129_000M1_scaffold_270_8
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4780..5571)
DNA (792bp) protein (264aa)
SPFH/Band 7/PHB domain protein n=2 Tax=Bacteroides RepID=D1JMB6_9BACE
Putative SPFH domain / Band 7 family protein {ECO:0000313|EMBL:EFI40103.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_129_000M1_scaffold_270_9
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5555..5725)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K055_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40104.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5873..6088)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS13594.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_129_000M1_scaffold_270_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6706..7104)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMB5_9BACE
RNase H family protein {ECO:0000313|EMBL:KDS13593.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
Ribonuclease HI-related protein 3
L3_129_000M1_scaffold_270_12
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7108..7347)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JMB4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27501.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7307..7834)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JMB3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40107.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_129_000M1_scaffold_270_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8062..8379)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMB2_9BACE
MutS domain I family protein {ECO:0000313|EMBL:KDS13590.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_129_000M1_scaffold_270_15
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8383..8745)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JMB1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40109.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8742..9065)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JMB0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40110.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_17
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9120..9284
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27496.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_18
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9465..9638
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K063_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40112.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9635..9751)
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS13585.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_129_000M1_scaffold_270_20
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9964..10455)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27495.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_21
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10501..11154)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27494.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_129_000M1_scaffold_270_22
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11681..12025)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27493.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_23
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12128..12391)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K069_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40118.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12397..12813)
DNA (417bp) protein (139aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K070_9BACE
Helix-turn-helix family protein {ECO:0000313|EMBL:KDS18992.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
L3_129_000M1_scaffold_270_25
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12875..13114)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K071_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40120.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_26
unknown

Not on your lists

comp(13285..13779)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_129_000M1_scaffold_270_27
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13776..14201)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27491.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_28
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14209..14388)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JMA3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40123.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_129_000M1_scaffold_270_29
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14393..14803)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JMA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27489.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_129_000M1_scaffold_270_30
unknown

Not on your lists

comp(14806..15018)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 123 in total

View Taxonomy