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L3_129_000M1_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_314_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..480)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44038.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
CotS family spore coat protein
L3_129_000M1_scaffold_314_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

649..2046
DNA (1398bp) protein (466aa)
6-phospho-alpha-glucosidase n=2 Tax=Clostridium RepID=D3AMK5_9CLOT
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:CCZ63178.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
6-phospho-alpha-glucosidase
L3_129_000M1_scaffold_314_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2061..2381
DNA (321bp) protein (107aa)
putative PTS system, IIA component (EC:2.7.1.-)
UPI0002DC9208 related cluster n=1 Tax=unknown RepID=UPI0002DC9208
Uncharacterized protein {ECO:0000313|EMBL:ENY96203.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_129_000M1_scaffold_314_4
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

2384..3001
DNA (618bp) protein (206aa)
UPI0003113B5E related cluster n=1 Tax=unknown RepID=UPI0003113B5E
Uncharacterized protein {ECO:0000313|EMBL:CDA33679.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
hypothetical protein
L3_129_000M1_scaffold_314_5
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3092..3829)
DNA (738bp) protein (246aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
purine nucleoside phosphorylase n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B47A9C
purine nucleoside phosphorylase DeoD-type
L3_129_000M1_scaffold_314_6
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3845..4141)
DNA (297bp) protein (99aa)
Oligo-beta-mannoside-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:CRH85311.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CRH85311.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
PTS cellobiose transporter subunit IIB n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B7A788
celA1; PTS system cellobiose-specific IIB component
L3_129_000M1_scaffold_314_7
unknown

Not on your lists

comp(4158..6062)
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B568E5
L3_129_000M1_scaffold_314_8
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6187..7410)
DNA (1224bp) protein (408aa)
PTS lactose transporter subunit IIC n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B5109E
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
PTS system transporter subunit IIC
L3_129_000M1_scaffold_314_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7555..8064)
DNA (510bp) protein (170aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=7 Tax=Clostridium clostridioforme RepID=N9XEU7_9CLOT
tRNA/rRNA methyltransferase SpoU
L3_129_000M1_scaffold_314_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8070..9239)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44040.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
class I and II aminotransferase
L3_129_000M1_scaffold_314_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9236..9718)
DNA (483bp) protein (161aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4V0_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY44041.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AsnC family transcriptional regulator
L3_129_000M1_scaffold_314_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9762..10355)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J569_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44042.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Hydrogenase maturation factor
L3_129_000M1_scaffold_314_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10352..12031)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRZ2_9CLOT
Vancomycin B-type resistance protein VanW {ECO:0000313|EMBL:KJJ69999.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
VanW family protein
L3_129_000M1_scaffold_314_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12220..13002)
DNA (783bp) protein (261aa)
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44045.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_129_000M1_scaffold_314_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12999..13685)
DNA (687bp) protein (229aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=4 Tax=Clostridium RepID=A8RQG2_9CLOT
L3_129_000M1_scaffold_314_16
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14078..14965)
DNA (888bp) protein (296aa)
AP endonuclease family 2 n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLT8_9CLOT
AP endonuclease family 2 {ECO:0000313|EMBL:CCY85967.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Sugar phosphate isomerases/epimerases
L3_129_000M1_scaffold_314_17
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14962..15891)
DNA (930bp) protein (310aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.-.-)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Clostridium sp. CAG:149 RepID=R5M353_9CLOT
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:CCY85968.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_129_000M1_scaffold_314_18
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15928..17292)
DNA (1365bp) protein (455aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC07_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE12753.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type sugar transport system, periplasmic component
L3_129_000M1_scaffold_314_19
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17321..18148)
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC08_9CLOT
ABC transporter permease {ECO:0000313|EMBL:KEZ90647.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC-type sugar transport system, permease component
L3_129_000M1_scaffold_314_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18145..19020)
DNA (876bp) protein (292aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5ML39_9CLOT
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KEZ90648.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L3_129_000M1_scaffold_314_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19017..19910)
DNA (894bp) protein (298aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DE34_CLOSC
HAD-superfamily hydrolase, subfamily IIB
Cof-like hydrolase {ECO:0000313|EMBL:CCY85972.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_129_000M1_scaffold_314_22
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20091..21707)
DNA (1617bp) protein (539aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=D4CC11_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY85973.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_129_000M1_scaffold_314_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21749..23599)
DNA (1851bp) protein (617aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44048.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_129_000M1_scaffold_314_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23605..24099)
DNA (495bp) protein (165aa)
dCMP deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA99_9CLOT
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EEG51731.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_129_000M1_scaffold_314_25
unknown

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comp(24194..24523)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B4725F
L3_129_000M1_scaffold_314_26
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24596..24976)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET82_9FIRM
Uncharacterized protein with conserved CXXC pairs {ECO:0000313|EMBL:EXG88146.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_129_000M1_scaffold_314_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24970..26232)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4V9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44051.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_129_000M1_scaffold_314_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26236..27693)
DNA (1458bp) protein (486aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J576_9CLOT
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:CCY44052.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
FAD dependent oxidoreductase
L3_129_000M1_scaffold_314_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28030..32046
DNA (4017bp) protein (1339aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XEE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98072.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_129_000M1_scaffold_314_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32109..32786)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44060.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcriptional regulator, GntR family
Displaying items 1-30 of 47 in total

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