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L3_129_000M1_scaffold_331

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_331_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107..703
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45818.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_129_000M1_scaffold_331_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

696..1193
DNA (498bp) protein (166aa)
Hydrolase, NUDIX family n=4 Tax=Clostridiales RepID=A7B3W0_RUMGN
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN77328.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Isopentenyldiphosphate isomerase
L3_129_000M1_scaffold_331_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1190..1846)
DNA (657bp) protein (219aa)
Channel protein, hemolysin III family n=4 Tax=Clostridiales RepID=A7B3V9_RUMGN
Channel protein, hemolysin III family {ECO:0000313|EMBL:EDN77327.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
channel protein, hemolysin III family
L3_129_000M1_scaffold_331_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2069..3652
DNA (1584bp) protein (528aa)
DEAD/DEAH box helicase n=4 Tax=Clostridiales RepID=A7B3V8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45815.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Superfamily II DNA and RNA helicases
L3_129_000M1_scaffold_331_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3749..4363
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B3V7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77325.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_129_000M1_scaffold_331_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4429..5469)
DNA (1041bp) protein (347aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=4 Tax=Clostridiales RepID=F7JZF2_9FIRM
Putative carbamate kinase {ECO:0000313|EMBL:EDN78949.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_129_000M1_scaffold_331_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5453..7021)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78948.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted integral membrane protein
L3_129_000M1_scaffold_331_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7172..8911
DNA (1740bp) protein (580aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSQ7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17491.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter
L3_129_000M1_scaffold_331_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8904..10646
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT5_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78946.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC transporter ATP-binding protein/permease
L3_129_000M1_scaffold_331_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10664..11050)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78945.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_129_000M1_scaffold_331_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11235..12017
DNA (783bp) protein (261aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT3_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78944.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC transporter
L3_129_000M1_scaffold_331_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12010..13209
DNA (1200bp) protein (400aa)
Putative flagellar protein FliS n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT2_RUMGN
Putative flagellar protein FliS {ECO:0000313|EMBL:EDN78943.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-2 type transporter
L3_129_000M1_scaffold_331_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13363..13587
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45806.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sporulation protein, YlmC/YmxH family
L3_129_000M1_scaffold_331_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13649..14098
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=3 Tax=Clostridiales RepID=F7JZE5_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator NrdR
L3_129_000M1_scaffold_331_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14103..14837
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=3 Tax=Clostridiales RepID=F7JZE4_9FIRM
L3_129_000M1_scaffold_331_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14903..15655
DNA (753bp) protein (251aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EDN78937.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EDN78937.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZS6_RUMGN
L3_129_000M1_scaffold_331_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15672..16805
DNA (1134bp) protein (378aa)
CobW/P47K family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZS5_RUMGN
CobW/P47K family protein {ECO:0000313|EMBL:EDN78936.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Putative GTPases (G3E family)
L3_129_000M1_scaffold_331_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16830..17777
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZS4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78935.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Putative GTPases (G3E family)
L3_129_000M1_scaffold_331_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..18758
DNA (960bp) protein (320aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZS3_RUMGN
Kinase, PfkB family {ECO:0000313|EMBL:EDN78934.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_129_000M1_scaffold_331_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18832..19074
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZS2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78933.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
HPrNtr domain-containing protein
L3_129_000M1_scaffold_331_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19156..19989
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=2 Tax=Clostridiales RepID=A7AZS1_RUMGN
L3_129_000M1_scaffold_331_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20466..20894
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZR9_RUMGN
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LSU ribosomal protein L13P
L3_129_000M1_scaffold_331_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20921..21313
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=3 Tax=Clostridiales RepID=F7JZD6_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SSU ribosomal protein S9P
L3_129_000M1_scaffold_331_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21414..22181
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78840.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_129_000M1_scaffold_331_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22153..22488
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78839.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_129_000M1_scaffold_331_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22513..22749
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78838.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_129_000M1_scaffold_331_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22956..23846)
DNA (891bp) protein (297aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH5_RUMGN
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN78836.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LysR family transcriptional regulator
L3_129_000M1_scaffold_331_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24008..24904
DNA (897bp) protein (299aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH4_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN78835.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Thioredoxin reductase
L3_129_000M1_scaffold_331_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24914..25945
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78834.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_129_000M1_scaffold_331_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26062..26871
DNA (810bp) protein (270aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridiales RepID=A7AZH2_RUMGN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN78833.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
oxidoreductase
Displaying items 1-30 of 53 in total

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