ggKbase home page

L3_129_000M1_scaffold_370

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_370_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98..271)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZK84_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73328.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_129_000M1_scaffold_370_2
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

320..535
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7EHN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02414.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_3
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

570..4127
DNA (3558bp) protein (1186aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EJE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02413.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
cell surface protein
L3_129_000M1_scaffold_370_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4374..5300
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ELN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02412.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_5
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5327..5767
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IJ19_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02411.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_6
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5780..6046
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZK80_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02410.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6055..7218
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZEH0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73322.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_129_000M1_scaffold_370_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7241..8911
DNA (1671bp) protein (557aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9TUJ1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73321.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ABC transporter related protein
L3_129_000M1_scaffold_370_9
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8956..9867)
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZCW6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02407.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_10
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9994..12348)
DNA (2355bp) protein (785aa)
Surface antigen n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VFK9_9BACE
Surface antigen {ECO:0000313|EMBL:EFV24340.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
surface antigen (D15)
L3_129_000M1_scaffold_370_11
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12358..16908)
DNA (4551bp) protein (1517aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D2EVL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA21988.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_129_000M1_scaffold_370_12
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17016..19310)
DNA (2295bp) protein (765aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=6 Tax=root RepID=A7V4C9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02403.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
multi-sensor hybrid histidine kinase
L3_129_000M1_scaffold_370_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19315..20658)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=3 Tax=Bacteroides RepID=E5VFK6_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EOS06725.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
MATE efflux family protein
L3_129_000M1_scaffold_370_14
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20660..21898)
DNA (1239bp) protein (413aa)
Peptidase M16 inactive domain protein n=6 Tax=Bacteroides RepID=D2EVL4_9BACE
Peptidase M16 inactive domain-containing protein {ECO:0000313|EMBL:EFV24336.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
peptidase M16
L3_129_000M1_scaffold_370_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21923..22762)
DNA (840bp) protein (280aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides RepID=D2EVL5_9BACE
peptidyl-prolyl cis-trans isomerase cyclophilin type
L3_129_000M1_scaffold_370_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22856..24283
DNA (1428bp) protein (476aa)
Sigma-54 interaction domain-containing protein n=2 Tax=root RepID=E5VFK3_9BACE
Sigma-54 interaction domain-containing protein {ECO:0000313|EMBL:EFV24334.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Fis family transcriptional regulator
L3_129_000M1_scaffold_370_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24506..24688
DNA (183bp) protein (61aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V4D6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73312.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_129_000M1_scaffold_370_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24783..27320)
DNA (2538bp) protein (846aa)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V4D7_BACUN
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:KDS55191.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
alanyl dipeptidyl peptidase
L3_129_000M1_scaffold_370_19
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27331..28002)
DNA (672bp) protein (224aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VFK0_9BACE
RNA pseudouridylate synthase {ECO:0000313|EMBL:EFV24331.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_129_000M1_scaffold_370_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28095..28841)
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=7 Tax=Bacteroides RepID=A7V4D9_BACUN
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EIY73309.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_129_000M1_scaffold_370_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28873..29457)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=3 Tax=Bacteroides RepID=A7V4E0_BACUN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDO53827.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
transcriptional regulator
L3_129_000M1_scaffold_370_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30411..31721)
DNA (1311bp) protein (437aa)
Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V4E4_BACUN
Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family {ECO:0000313|EMBL:EDO53831.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative transmembrane anaerobic C4-dicarboxylate transporter
L3_129_000M1_scaffold_370_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31774..32607)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V4E5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV24327.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_129_000M1_scaffold_370_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32620..32988)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=7 Tax=Bacteroides RepID=A7V4E6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73689.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
GntR family transcriptional regulator
L3_129_000M1_scaffold_370_25
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32991..33821)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=root RepID=R7EIA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02390.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_129_000M1_scaffold_370_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33821..34672)
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=7 Tax=Bacteroides RepID=A7V4E8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73687.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ABC transporter related protein
L3_129_000M1_scaffold_370_27
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34913..35842
DNA (930bp) protein (310aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2EVN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA22012.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
transcriptional regulator
L3_129_000M1_scaffold_370_28
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35890..37323)
DNA (1434bp) protein (478aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides RepID=D2EVN6_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFA22013.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_129_000M1_scaffold_370_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37341..38291)
DNA (951bp) protein (317aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V4F2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV24321.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
phosphate ABC transporter substrate-binding protein, PhoT family
L3_129_000M1_scaffold_370_30
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38303..39118)
DNA (816bp) protein (272aa)
TonB-dependent receptor n=7 Tax=Bacteroides RepID=A7V4F3_BACUN
TonB family domain-containing protein {ECO:0000313|EMBL:EFV24320.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
outer membrane transport energization protein TonB
Displaying items 1-30 of 34 in total

View Taxonomy