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L3_129_000M1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_379_1

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comp(3..155)
DNA (153bp) protein (51aa)
Group II intron-encoding maturase n=1 Tax=gut metagenome RepID=J9GW74_9ZZZZ
hypothetical protein
Group II intron-encoding maturase {ECO:0000313|EMBL:EJX07228.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_129_000M1_scaffold_379_2
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(142..933)
DNA (792bp) protein (264aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6B0_9CLOT
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EFE14098.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
phage/plasmid primase, P4 family, C-terminal domain
L3_129_000M1_scaffold_379_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1212..2156
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8U0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36132.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_129_000M1_scaffold_379_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2301..2720
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36133.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_129_000M1_scaffold_379_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2724..3302
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37921.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_129_000M1_scaffold_379_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3507..5477
DNA (1971bp) protein (657aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHQ46911.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Predicted ATP-dependent endonuclease of the OLD family
L3_129_000M1_scaffold_379_7
unknown

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5491..5580
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T7_9CLOT
L3_129_000M1_scaffold_379_8
unknown

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comp(5837..5965)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_129_000M1_scaffold_379_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5981..7618)
DNA (1638bp) protein (546aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ71_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERI90559.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_129_000M1_scaffold_379_10
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7622..8569)
DNA (948bp) protein (316aa)
Uncharacterized domain HDIG n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GY90_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDE32036.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
uncharacterized domain HDIG
L3_129_000M1_scaffold_379_11
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8553..8702)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ECW6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18469.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_379_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8877..11258
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPG7_9FIRM
MutS2 family protein
L3_129_000M1_scaffold_379_13
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11274..11975
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1W6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDE33330.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_129_000M1_scaffold_379_14
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11972..13381
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H107_9FIRM
Signal transduction histidine kinase
L3_129_000M1_scaffold_379_15
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13483..13983)
DNA (501bp) protein (167aa)
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Clostridiales RepID=D4LPG4_9FIRM
L3_129_000M1_scaffold_379_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14056..14667)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ECX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90566.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Hydrogenase maturation factor
L3_129_000M1_scaffold_379_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14678..14785)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97509.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_129_000M1_scaffold_379_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14772..16457)
DNA (1686bp) protein (562aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H2Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33323.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_129_000M1_scaffold_379_19
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16834..17514
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ80_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERI90569.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_129_000M1_scaffold_379_20
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17511..19334)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33320.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_379_21
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19437..19736)
DNA (300bp) protein (100aa)
Thioredoxin n=2 Tax=Clostridiales RepID=R7H2Y1_9FIRM
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ERI90571.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_129_000M1_scaffold_379_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19786..20688)
DNA (903bp) protein (301aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1Z5_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CDE33316.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_129_000M1_scaffold_379_23
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21001..22185
DNA (1185bp) protein (395aa)
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family n=3 Tax=Clostridiales PF8_9FIRM">RepID=D4LPF8_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CBL18459.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_379_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22493..23572)
DNA (1080bp) protein (360aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. SR1/5 PF7_9FIRM">RepID=D4LPF7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL18458.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_129_000M1_scaffold_379_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23735..24424
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H0Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33309.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_129_000M1_scaffold_379_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24829..26013)
DNA (1185bp) protein (395aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CBL18456.1}; EC=2.1.2.3 {ECO:0000313|EMBL:CBL18456.1};; EC=3.5.4.10 {ECO:0000313|EMBL:CBL18456.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=2 Tax=Clostridiales PF5_9FIRM">RepID=D4LPF5_9FIRM
L3_129_000M1_scaffold_379_27
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26052..26765)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H0Y7_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CDE33304.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
IMP cyclohydrolase-like protein.
L3_129_000M1_scaffold_379_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27031..27867)
DNA (837bp) protein (279aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ91_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERI90579.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
N-acetylmuramoyl-L-alanine amidase
L3_129_000M1_scaffold_379_29
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27860..29314)
DNA (1455bp) protein (485aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Ruminococcus PF3_9FIRM">RepID=D4LPF3_9FIRM
L3_129_000M1_scaffold_379_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29383..29952)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ECY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90581.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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