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L3_129_000M1_scaffold_857

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_857_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(551..2443)
DNA (1893bp) protein (631aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17093.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted membrane protein (DUF2207).
L3_129_000M1_scaffold_857_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2506..3102)
DNA (597bp) protein (199aa)
LemA family protein n=2 Tax=Lachnospiraceae RepID=L1PXR2_9FIRM
LemA family protein {ECO:0000313|EMBL:EDS20336.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_129_000M1_scaffold_857_3
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3129..3737)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P4T2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20335.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_129_000M1_scaffold_857_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3841..4188
DNA (348bp) protein (116aa)
Helix-turn-helix n=5 Tax=Clostridiales RepID=D4MUI0_9FIRM
Helix-turn-helix.
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDA33417.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_129_000M1_scaffold_857_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4331..5125)
DNA (795bp) protein (265aa)
GTPases-translation elongation factors n=2 Tax=Clostridiales RepID=D4MUH8_9FIRM
Putative translation elongation factor Tu {ECO:0000313|EMBL:EDS20331.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
GTPases-translation elongation factors
L3_129_000M1_scaffold_857_6
unknown

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comp(5138..6817)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P4S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CBL39043.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_129_000M1_scaffold_857_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6967..8160)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=4 Tax=Clostridiales RepID=D4MUH6_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_857_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8327..10438)
DNA (2112bp) protein (704aa)
Elongation factor G n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZET3_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
elongation factor G
L3_129_000M1_scaffold_857_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10507..11019)
DNA (513bp) protein (171aa)
30S ribosomal protein S7 n=3 Tax=Clostridiales RepID=B0P4S4_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ribosomal protein S7, bacterial/organelle
L3_129_000M1_scaffold_857_10
unknown

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comp(11148..11564)
DNA (417bp) protein (139aa)
30S ribosomal protein S12 n=5 Tax=Clostridiales RepID=D4MUH5_9FIRM
SSU ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_129_000M1_scaffold_857_11
unknown

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comp(13068..16664)
DNA (3597bp) protein (1199aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBL39040.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Clostridiales RepID=D4MUH4_9FIRM
L3_129_000M1_scaffold_857_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16701..20498)
DNA (3798bp) protein (1266aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=4 Tax=Clostridiales RepID=D4MUH3_9FIRM
L3_129_000M1_scaffold_857_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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20779..21180
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PXR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY20441.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_857_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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21332..21535
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PXH1_9FIRM
Predicted amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:EKY20439.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_129_000M1_scaffold_857_15
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21483..21866
DNA (384bp) protein (128aa)
Predicted amidohydrolase n=2 Tax=Clostridiales RepID=D4MUH0_9FIRM
Predicted amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:EDS20320.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Displaying 15 items

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