ggKbase home page

L3_129_000M1_scaffold_1113

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_1113_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93..701
DNA (609bp) protein (203aa)
YibE/F-like protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TKM1_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CCZ63899.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted multitransmembrane protein
L3_129_000M1_scaffold_1113_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

695..1000
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RI69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50422.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
YibE/F-like protein.
L3_129_000M1_scaffold_1113_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1494..2429
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q332_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50424.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Domain of unknown function (DUF1848).
L3_129_000M1_scaffold_1113_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2443..2610
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TE05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63875.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_129_000M1_scaffold_1113_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2939..3514
DNA (576bp) protein (192aa)
Maltose O-acetyltransferase family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RI74_9FIRM
Maltose O-acetyltransferase family protein {ECO:0000313|EMBL:ERK50427.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Acetyltransferase (isoleucine patch superfamily)
L3_129_000M1_scaffold_1113_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3689..4621
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TDZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63873.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1113_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5217..6161
DNA (945bp) protein (315aa)
Integral membrane protein n=2 Tax=Clostridiales RepID=R5U439_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CCZ63872.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
oroP; Orotate transport protein
L3_129_000M1_scaffold_1113_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6228..7661
DNA (1434bp) protein (478aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TY26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50431.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1113_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7741..8385
DNA (645bp) protein (215aa)
Chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=2 Tax=Clostridiales RepID=R5TDZ9_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:ERK50432.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_1113_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8369..9145
DNA (777bp) protein (259aa)
PF06940 domain protein n=2 Tax=Clostridiales RepID=R5TKJ5_9FIRM
PF06940 domain protein {ECO:0000313|EMBL:CCZ63869.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1113_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9302..9784)
DNA (483bp) protein (161aa)
Acetyltransferase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDZ1_9FIRM
Acetyltransferase {ECO:0000313|EMBL:CCZ63868.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Acetyltransferase (GNAT) family.
L3_129_000M1_scaffold_1113_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9935..10735
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U435_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50435.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L3_129_000M1_scaffold_1113_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10846..11391
DNA (546bp) protein (182aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Phosphodiesterase MJ0936 family n=1 Tax=Roseburia sp. CAG:50 RepID=R5TY20_9FIRM
phosphodiesterase, MJ0936 family
L3_129_000M1_scaffold_1113_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11399..11845
DNA (447bp) protein (149aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDZ6_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:ERK50437.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_1113_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11803..12804
DNA (1002bp) protein (334aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63865.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_129_000M1_scaffold_1113_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12967..14193)
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Clostridiales RepID=R5TKJ0_9FIRM
L3_129_000M1_scaffold_1113_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14425..14559
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q357_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50439.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_1113_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14650..15705
DNA (1056bp) protein (352aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDY6_9FIRM
L3_129_000M1_scaffold_1113_19
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15738..16190
DNA (453bp) protein (151aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=U2Q287_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK50441.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1113_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16277..16930
DNA (654bp) protein (218aa)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Clostridiales RepID=R5TY13_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
ArgJ; putative thiamine pyrophosphokinase
Displaying 20 items

View Taxonomy