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L3_129_000M1_scaffold_1489

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_1489_1
unknown

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comp(2..253)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_129_000M1_scaffold_1489_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(228..2282)
DNA (2055bp) protein (685aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Beta-galactosidase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIP1_9FIRM
beta-galactosidase
L3_129_000M1_scaffold_1489_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2640..3719)
DNA (1080bp) protein (360aa)
N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9B1_9FIRM
N-acetylmuramoyl-L-alanine amidase domain protein {ECO:0000313|EMBL:CCZ65542.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
N-acetylmuramoyl-L-alanine amidase domain protein
L3_129_000M1_scaffold_1489_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3733..4176)
DNA (444bp) protein (148aa)
Predicted transcriptional regulator n=2 Tax=Clostridiales RepID=R5U333_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ65541.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
putative transcriptional regulator
L3_129_000M1_scaffold_1489_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4316..5569)
DNA (1254bp) protein (418aa)
FHA domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QJN5_9FIRM
FHA domain protein {ECO:0000313|EMBL:ERK41498.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1489_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5559..5864)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QRZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41497.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_1489_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5933..6466)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PBK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41496.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1489_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6475..7392)
DNA (918bp) protein (306aa)
DNA/RNA endonuclease G NUC1 n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9A8_9FIRM
DNA/RNA endonuclease G NUC1 {ECO:0000313|EMBL:CCZ65537.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
NUC1; DNA/RNA endonuclease G, NUC1
L3_129_000M1_scaffold_1489_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7421..8896)
DNA (1476bp) protein (492aa)
DNA polymerase III alpha subunit n=1 Tax=Roseburia sp. CAG:50 RepID=R5U330_9FIRM
DNA polymerase III alpha subunit {ECO:0000313|EMBL:CCZ65536.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
PolC; DNA polymerase III subunit alpha
L3_129_000M1_scaffold_1489_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8897..9079)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TIR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65535.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1489_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9176..10393)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QRZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41492.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1489_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10409..11167)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PBK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41491.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_1489_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11130..11561)
DNA (432bp) protein (144aa)
Flp pilus assembly protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9A3_9FIRM
Flp pilus assembly protein {ECO:0000313|EMBL:CCZ65532.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Flp pilus assembly protein
Displaying 13 items

View Taxonomy