ggKbase home page

L3_129_000M1_scaffold_1911

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_1911_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..334
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RLK4_9FIRM
Nitroreductase {ECO:0000313|EMBL:CCZ64954.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
nitroreductase
L3_129_000M1_scaffold_1911_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(477..1388)
DNA (912bp) protein (304aa)
Putative tyrosine recombinase XerC n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGY9_9FIRM
Putative tyrosine recombinase XerC {ECO:0000313|EMBL:CCZ64953.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
xerC; tyrosine recombinase xerC
L3_129_000M1_scaffold_1911_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1667..3262)
DNA (1596bp) protein (532aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Hydroxylamine reductase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q6D0_9FIRM
hybrid cluster protein
L3_129_000M1_scaffold_1911_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3533..3733)
DNA (201bp) protein (67aa)
Flavin reductase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PM41_9FIRM
NADPH-dependent fmn reductase domain protein {ECO:0000313|EMBL:CCZ64951.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
NADPH-dependent fmn reductase domain protein
L3_129_000M1_scaffold_1911_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3767..4000
DNA (234bp) protein (78aa)
LysR substrate binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64948.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1911_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4228..5985)
DNA (1758bp) protein (586aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RDF5_9FIRM
L3_129_000M1_scaffold_1911_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6403..7494)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64880.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1911_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7560..8285)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TNE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64879.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Displaying 8 items

View Taxonomy