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L3_129_000M1_scaffold_1965

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_1965_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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290..976
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R1N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47523.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_1965_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1070..2341
DNA (1272bp) protein (424aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U3T1_9FIRM
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:CCZ63762.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Putative peptidoglycan-binding domain-containing protein
L3_129_000M1_scaffold_1965_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2504..3598
DNA (1095bp) protein (365aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PTU8_9FIRM
L3_129_000M1_scaffold_1965_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3798..4646
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TDN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63760.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1965_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4720..5400)
DNA (681bp) protein (227aa)
PAP2 family protein n=2 Tax=Clostridiales RepID=U2PUT8_9FIRM
PAP2 family protein {ECO:0000313|EMBL:ERK47519.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
PAP2 superfamily.
L3_129_000M1_scaffold_1965_6
unknown

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5654..5797
DNA (144bp) protein (48aa)

This feature has no annotations

L3_129_000M1_scaffold_1965_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5794..7320
DNA (1527bp) protein (509aa)
L-fucose isomerase n=2 Tax=Clostridiales RepID=R5TDN3_9FIRM
L-fucose isomerase {ECO:0000313|EMBL:CCZ63758.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
FucI; L-fucose isomerase
L3_129_000M1_scaffold_1965_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7339..7761
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U3S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63757.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_1965_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7841..8107
DNA (267bp) protein (89aa)
Transporter, SSS family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PTJ0_9FIRM
Transporter, SSS family {ECO:0000313|EMBL:ERK47084.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
PutP; Na+/proline, Na+/panthothenate symporter
Displaying 9 items

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