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L3_129_000M1_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_337_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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266..1960
DNA (1695bp) protein (565aa)
Transposase, IS4 family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPA2_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:ERK52537.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2089..3108
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=2 Tax=Clostridiales RepID=U2RG75_9FIRM
L3_129_000M1_scaffold_337_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3424..4815
DNA (1392bp) protein (464aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TMW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64669.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_337_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4872..5528
DNA (657bp) protein (219aa)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=U2PPV6_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERK52540.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
putative ADP-ribose pyrophosphatase
L3_129_000M1_scaffold_337_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5756..6289
DNA (534bp) protein (178aa)
VanZ-like protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q845_9FIRM
VanZ-like protein {ECO:0000313|EMBL:ERK52541.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6414..8777
DNA (2364bp) protein (788aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TG62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64665.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_337_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8918..10297
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJ72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81507.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_129_000M1_scaffold_337_8
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10405..11067
DNA (663bp) protein (221aa)
Hydrolase, NUDIX family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE4_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG81420.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
putative ADP-ribose pyrophosphatase
L3_129_000M1_scaffold_337_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11221..13863
DNA (2643bp) protein (881aa)
Anaerobic dehydrogenase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIU9_9FIRM
Anaerobic dehydrogenase {ECO:0000313|EMBL:CCZ65623.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
BisC; anaerobic dehydrogenase
L3_129_000M1_scaffold_337_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13887..14612
DNA (726bp) protein (242aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=U2NWP0_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERK42470.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
L3_129_000M1_scaffold_337_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14609..15286
DNA (678bp) protein (226aa)
Predicted cytoplasmic chaperone TorD n=2 Tax=Clostridiales RepID=R5TIX7_9FIRM
Predicted cytoplasmic chaperone TorD {ECO:0000313|EMBL:CCZ65625.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
TorD-like chaperone
L3_129_000M1_scaffold_337_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15271..16317
DNA (1047bp) protein (349aa)
Sulfite reductase, subunit A n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QUS4_9FIRM
Sulfite reductase, subunit A {ECO:0000313|EMBL:ERK42472.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
sulfite reductase, subunit A
L3_129_000M1_scaffold_337_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16322..17110
DNA (789bp) protein (263aa)
Sulfite reductase, subunit B n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QMF2_9FIRM
Sulfite reductase, subunit B {ECO:0000313|EMBL:ERK42473.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17542..17796
DNA (255bp) protein (85aa)
Addiction module antitoxin, Axe family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NWP3_9FIRM
Addiction module antitoxin, Axe family {ECO:0000313|EMBL:ERK42475.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18172..19599
DNA (1428bp) protein (476aa)
FAD/FMN-containing dehydrogenases (EC:1.1.3.15)
FAD/FMN-containing dehydrogenases n=1 Tax=Roseburia sp. CAG:50 RepID=R5TK39_9FIRM
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:CCZ63704.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_129_000M1_scaffold_337_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19704..20840
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenases (EC:1.3.8.1)
Acyl-CoA dehydrogenases n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDI1_9FIRM
Acyl-CoA dehydrogenases {ECO:0000313|EMBL:CCZ63703.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_129_000M1_scaffold_337_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20933..21712
DNA (780bp) protein (260aa)
Electron transfer flavoprotein n=2 Tax=Clostridiales RepID=U2PFH0_9FIRM
Electron transfer flavoprotein {ECO:0000313|EMBL:ERK42479.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Electron transfer flavoprotein, beta subunit
L3_129_000M1_scaffold_337_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21726..22712
DNA (987bp) protein (329aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NWP8_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:ERK42480.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Electron transfer flavoprotein, alpha subunit
L3_129_000M1_scaffold_337_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22814..24064)
DNA (1251bp) protein (417aa)
Diguanylate cyclase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5Z2_9FIRM
Diguanylate cyclase {ECO:0000313|EMBL:CCZ64472.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
diguanylate cyclase
L3_129_000M1_scaffold_337_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24074..24619)
DNA (546bp) protein (182aa)
4-vinyl reductase 4VR n=2 Tax=Clostridiales RepID=R5TZT0_9FIRM
4-vinyl reductase 4VR {ECO:0000313|EMBL:CCZ64471.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
4-vinyl reductase 4VR
L3_129_000M1_scaffold_337_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24857..26731
DNA (1875bp) protein (625aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QMF8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK42483.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26811..27698
DNA (888bp) protein (296aa)
Putative membrane protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PFH4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:ERK42484.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_129_000M1_scaffold_337_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27769..28827
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NWQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42485.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_24
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28844..29815)
DNA (972bp) protein (324aa)
CAAX amino terminal protease family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFM8_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CCZ64468.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
putative metal-dependent membrane protease
L3_129_000M1_scaffold_337_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30007..33483
DNA (3477bp) protein (1159aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5Y7_9FIRM
hypothetical protein
L3_129_000M1_scaffold_337_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33550..34524
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Clostridiales RepID=U2QMG3_9FIRM
L3_129_000M1_scaffold_337_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34731..35507
DNA (777bp) protein (259aa)
RNA methyltransferase, TrmH family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NWQ3_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ERK42490.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
RNA methyltransferase, TrmH family, group 3
L3_129_000M1_scaffold_337_28
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35479..35778
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PEG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42491.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_337_29
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35780..36304
DNA (525bp) protein (175aa)
3H domain protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFM1_9FIRM
3H domain protein {ECO:0000313|EMBL:CCZ64463.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted small molecule binding protein (contains 3H domain)
L3_129_000M1_scaffold_337_30
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36435..37097
DNA (663bp) protein (221aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5Y0_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCZ64462.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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