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L3_129_000M1_scaffold_450

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_450_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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143..2254
DNA (2112bp) protein (704aa)
Sulfate permease n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R647_9FIRM
Sulfate permease {ECO:0000313|EMBL:ERK46162.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Sulfate permease and related transporters (MFS superfamily)
L3_129_000M1_scaffold_450_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2364..3356
DNA (993bp) protein (331aa)
Transcriptional regulator, LacI family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PPV4_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERK46161.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
LacI family transcriptional regulator
L3_129_000M1_scaffold_450_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3522..6515
DNA (2994bp) protein (998aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Beta galactosidase small chain n=1 Tax=Roseburia sp. CAG:50 RepID=R5U0T6_9FIRM
glycoside hydrolase
L3_129_000M1_scaffold_450_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6656..7567
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U6T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64752.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7734..9116)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TGE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64753.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Permeases
L3_129_000M1_scaffold_450_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9303..10358)
DNA (1056bp) protein (352aa)
Twitching motility protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TN36_9FIRM
Twitching motility protein {ECO:0000313|EMBL:CCZ64754.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
pilus retraction protein PilT
L3_129_000M1_scaffold_450_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10372..10884)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64755.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10887..11351)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U0U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64756.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11368..11859)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46153.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_450_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11876..12217)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64758.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12230..13279)
DNA (1050bp) protein (350aa)
Bacterial type II secretion system domain protein F n=1 Tax=Roseburia sp. CAG:50 RepID=R5TN40_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:CCZ64759.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Type II secretory pathway, component PulF
L3_129_000M1_scaffold_450_12
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13455..14456)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64321.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_129_000M1_scaffold_450_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14671..15921
DNA (1251bp) protein (417aa)
Bacterial transcriptional activator domain protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF84_9FIRM
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:CCZ64320.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain.
L3_129_000M1_scaffold_450_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15992..16423
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64319.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16642..16842
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64318.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16855..21384
DNA (4530bp) protein (1510aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000364F77A
Fibro-slime domain {ECO:0000313|EMBL:CCY98437.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
fibro-slime domain
L3_129_000M1_scaffold_450_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21506..22999
DNA (1494bp) protein (498aa)
Cna protein B-type domain./Gram positive anchor n=1 Tax=Coprococcus catus GD/7 RepID=D4JAR6_9FIRM
Cna protein B-type domain./Gram positive anchor.
Cna protein B-type domain./Gram positive anchor {ECO:0000313|EMBL:CBK81437.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_129_000M1_scaffold_450_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23135..24016
DNA (882bp) protein (294aa)
LPXTG-site transpeptidase (Sortase) family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF79_9FIRM
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CCZ64315.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
LPXTG-site transpeptidase (sortase) family protein
L3_129_000M1_scaffold_450_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24013..24915
DNA (903bp) protein (301aa)
Sortase family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLT5_9FIRM
Sortase family protein {ECO:0000313|EMBL:CCZ64314.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
LPXTG-site transpeptidase (sortase) family protein
L3_129_000M1_scaffold_450_20
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24946..25938
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q449_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50799.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_450_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25954..26466
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U5H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50798.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_450_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26480..27229
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RJA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50797.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_450_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27244..28044
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q345_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50796.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_450_24
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28046..29071
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64309.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29540..29761
DNA (222bp) protein (74aa)
Divergent AAA domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q444_9FIRM
Putative ATP-dependent DNA helicase {ECO:0000313|EMBL:CCZ64308.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
L3_129_000M1_scaffold_450_26
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29758..30330
DNA (573bp) protein (191aa)
Signal peptidase I n=2 Tax=Clostridiales RepID=R5U3Z1_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CCZ63822.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_450_27
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30645..32804
DNA (2160bp) protein (720aa)
ptsG: PTS system glucose-specific EIICBA component (EC:2.7.1.69 2.7.1.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63823.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_129_000M1_scaffold_450_28
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32806..34434
DNA (1629bp) protein (543aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q340_9FIRM
L3_129_000M1_scaffold_450_29
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34693..35526
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U272_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65226.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
transcriptional antiterminator, BglG
L3_129_000M1_scaffold_450_30
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35800..37158
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RJ92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50787.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted ATPase (AAA+ superfamily)
Displaying 30 items

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