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L3_129_000M1_scaffold_849

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_849_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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176..808
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43432.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Domain of unknown function (DUF1836).
L3_129_000M1_scaffold_849_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(964..1266)
DNA (303bp) protein (101aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridiales RepID=U2PGY1_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:ERK43431.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
TrpR-related protein YerC/YecD
L3_129_000M1_scaffold_849_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1531..1896
DNA (366bp) protein (122aa)
SnoaL-like polyketide cyclase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZ84_9FIRM
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:ERK43430.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_849_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2048..2695)
DNA (648bp) protein (216aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=2 Tax=Clostridiales RepID=R5U536_9FIRM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:CCZ64192.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L3_129_000M1_scaffold_849_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2791..4554)
DNA (1764bp) protein (588aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
Homocysteine S-methyltransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQ41_9FIRM
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ERK43428.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_849_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4565..6382)
DNA (1818bp) protein (606aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Methionine synthase I (cobalamin-dependent), methyltransferase domain (EC:2.1.1.10 2.1.1.13)
Methylenetetrahydrofolate reductase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXF2_9FIRM
L3_129_000M1_scaffold_849_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6460..7098)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TLG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64189.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
binding-protein-dependent transport systems inner membrane component
L3_129_000M1_scaffold_849_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7095..7853)
DNA (759bp) protein (253aa)
ABC transporter related n=1 Tax=Roseburia sp. CAG:50 RepID=R5TES6_9FIRM
ABC transporter related {ECO:0000313|EMBL:CCZ64188.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glycine/betaine ABC transporter ATPase
L3_129_000M1_scaffold_849_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7985..8923)
DNA (939bp) protein (313aa)
ABC-type glycine betaine transport periplasmic subunit n=2 Tax=Clostridiales RepID=R5U530_9FIRM
ABC-type glycine betaine transport periplasmic subunit {ECO:0000313|EMBL:CCZ64187.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glycine/betaine ABC transporter substrate-binding protein
L3_129_000M1_scaffold_849_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8987..9616)
DNA (630bp) protein (210aa)
Putative choline transport system permease protein opuBB n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQ36_9FIRM
Putative choline transport system permease protein opuBB {ECO:0000313|EMBL:ERK43423.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
binding-protein-dependent transport systems inner membrane component
L3_129_000M1_scaffold_849_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9900..12056)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64185.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_849_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12053..13420)
DNA (1368bp) protein (456aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PGX0_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:ERK43421.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
arylsulfatase regulator
L3_129_000M1_scaffold_849_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13790..14164)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43493.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_849_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14438..15724
DNA (1287bp) protein (429aa)
Putative hemolysin-related protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TYY3_9FIRM
Putative hemolysin-related protein {ECO:0000313|EMBL:CCZ64181.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
putative hemolysin-like protein
L3_129_000M1_scaffold_849_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15929..16954)
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PH66_9FIRM
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:ERK43491.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_849_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17176..17673)
DNA (498bp) protein (166aa)
Acetolactate synthase small subunit n=2 Tax=Clostridiales RepID=R5TLF1_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CCZ64179.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
IlvH; acetolactate synthase, small subunit
L3_129_000M1_scaffold_849_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17689..19416)
DNA (1728bp) protein (576aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PID4_9FIRM
Acetolactate synthase, large subunit {ECO:0000313|EMBL:ERK43489.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_849_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19431..20381)
DNA (951bp) protein (317aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQB5_9FIRM
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERK43488.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_849_19
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20385..20876)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Dihydrofolate reductase n=2 Tax=Clostridiales RepID=R5U3U7_9FIRM
dihydrofolate reductase
L3_129_000M1_scaffold_849_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21098..21946)
DNA (849bp) protein (283aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=2 Tax=Clostridiales RepID=U2PH59_9FIRM
Thymidylate synthase {ECO:0000313|EMBL:CCZ64748.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Displaying 20 items

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