ggKbase home page

L3_129_000M1_scaffold_885

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000M1_scaffold_885_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)
Uncharacterized protein (Fragment) n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QHN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40823.1}; Flags: Fragment;; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_885_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

217..438
DNA (222bp) protein (74aa)
NMT1/THI5-like protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9F0_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CCZ65592.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
ABC transporter substrate-binding protein
L3_129_000M1_scaffold_885_3
unknown

Not on your lists

440..622
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R675_9FIRM
L3_129_000M1_scaffold_885_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

628..834
DNA (207bp) protein (69aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIS8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ65593.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
L3_129_000M1_scaffold_885_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1012..2295)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QY15_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:ERK46193.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_129_000M1_scaffold_885_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2323..2937)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQY4_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted membrane protein
L3_129_000M1_scaffold_885_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2960..4546)
DNA (1587bp) protein (529aa)
ABC1 family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P6Q9_9FIRM
ABC1 family protein {ECO:0000313|EMBL:ERK46195.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted unusual protein kinase
L3_129_000M1_scaffold_885_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4590..4910)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PPY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46196.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_885_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5071..6180)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65599.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6202..7365)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65600.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7556..8062
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U382_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65601.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_12
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8055..8513)
DNA (459bp) protein (153aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Lipoprotein signal peptidase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9G0_9FIRM
peptidase A8 signal peptidase II
L3_129_000M1_scaffold_885_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8510..9925)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PPZ3_9FIRM
UPF0272 protein CXIVA_23130 {ECO:0000313|EMBL:CCZ65603.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10252..11940)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65604.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Subtilase family.
L3_129_000M1_scaffold_885_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12091..13017)
DNA (927bp) protein (309aa)
Phenazine biosynthesis protein, PhzF family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQZ2_9FIRM
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ERK46204.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
phenazine biosynthesis protein phzF
L3_129_000M1_scaffold_885_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13062..13937)
DNA (876bp) protein (292aa)
Permease of the drug n=1 Tax=Roseburia sp. CAG:50 RepID=R5U386_9FIRM
Permease of the drug {ECO:0000313|EMBL:CCZ65606.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
RhaT; drug/metabolite transporter superfamily permease
L3_129_000M1_scaffold_885_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13941..14726)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9G5_9FIRM
B12 binding domain protein {ECO:0000313|EMBL:ERK46206.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_885_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14730..16283)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65608.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16425..17681)
DNA (1257bp) protein (419aa)
Lysine-2 3-aminomutase n=2 Tax=Clostridiales RepID=R5TQP0_9FIRM
Lysine-2 3-aminomutase {ECO:0000313|EMBL:CCZ65609.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17750..18790)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TIW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65610.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19017..19835)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2P6S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46210.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_000M1_scaffold_885_22
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20159..20548)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65612.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_129_000M1_scaffold_885_23
unknown

Not on your lists

21246..21317
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 23 items

View Taxonomy