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L3_129_030G1_scaffold_3

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Displaying items 1-30 of 490 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_3_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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428..1021
DNA (594bp) protein (198aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9L7_CLOPF
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDT23046.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
RNA polymerase sigma factor
L3_129_030G1_scaffold_3_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1245..1730)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9L8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23043.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_129_030G1_scaffold_3_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1746..1931)
DNA (186bp) protein (62aa)
Transposase n=1 Tax=Clostridium perfringens F262 RepID=H7CUD3_CLOPF
Transposase {ECO:0000313|EMBL:EIA17655.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
transposase
L3_129_030G1_scaffold_3_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2244..3158
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CUD4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17656.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_129_030G1_scaffold_3_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3693..3923
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CUD5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16123.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_3_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4284..4514
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CUD6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17658.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_129_030G1_scaffold_3_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4838..6154
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPJ6_CLOPF
Acetyltransferase {ECO:0000313|EMBL:EIA17659.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acetyltransferase
L3_129_030G1_scaffold_3_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6597..6908)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BM39_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28293.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_129_030G1_scaffold_3_9
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7202..7702
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNP7_CLOPF
Transposase {ECO:0000313|EMBL:KEI08987.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
transposon, resolvase
L3_129_030G1_scaffold_3_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7803..8918
DNA (1116bp) protein (372aa)
Ribose-phosphate pyrophosphokinase n=2 Tax=Clostridium perfringens RepID=B1BM38_CLOPF
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EDS79015.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
putative IS transposase (OrfB)
L3_129_030G1_scaffold_3_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9490..9885)
DNA (396bp) protein (132aa)
Mutator MutT protein n=8 Tax=Clostridium perfringens RepID=H7CUE6_CLOPF
mutator mutT protein
Putative mutator mutT protein {ECO:0000313|EMBL:EDT23035.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_129_030G1_scaffold_3_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10071..10223
DNA (153bp) protein (51aa)
Putative viral A-type inclusion protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV9_CLOPF
Putative viral A-type inclusion protein {ECO:0000313|EMBL:EDT28177.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_3_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10217..11215
DNA (999bp) protein (333aa)
Putative viral A-type inclusion protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV9_CLOPF
Putative viral A-type inclusion protein {ECO:0000313|EMBL:EDT28177.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_129_030G1_scaffold_3_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11231..13249
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28149.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
GTPase subunit of restriction endonuclease
L3_129_030G1_scaffold_3_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13233..15110
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28350.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_129_030G1_scaffold_3_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15656..16111)
DNA (456bp) protein (152aa)
transposase, partial n=1 Tax=Streptococcus entericus RepID=UPI0003644B08
Integrase catalytic region {ECO:0000313|EMBL:EOR28114.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Integrase core domain protein
L3_129_030G1_scaffold_3_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16146..16385)
DNA (240bp) protein (80aa)
Transposase OrfA, IS3 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV6_CLOPF
Transposase OrfA, IS3 family {ECO:0000313|EMBL:EDT28219.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
transposase IS3/IS911 family protein
L3_129_030G1_scaffold_3_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16434..17453)
DNA (1020bp) protein (340aa)
Putative ribose operon repressor n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV5_CLOPF
Putative ribose operon repressor {ECO:0000313|EMBL:EDT28348.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ribose operon repressor
L3_129_030G1_scaffold_3_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17686..19005
DNA (1320bp) protein (440aa)
Substrate-binding protein MsmE n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUH9_CLOPS
ABC transporter periplasmic substrate-binding protein
Substrate-binding protein MsmE {ECO:0000313|EMBL:ABG85641.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_129_030G1_scaffold_3_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19027..19896
DNA (870bp) protein (290aa)
Transmembrane permease MsmF n=3 Tax=Clostridium RepID=Q0SUH8_CLOPS
transmembrane permease MsmF
Transmembrane permease MsmF {ECO:0000313|EMBL:CDB14449.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_129_030G1_scaffold_3_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19898..20749
DNA (852bp) protein (284aa)
Transmembrane permease MsmG n=2 Tax=Clostridium perfringens RepID=Q0SUH7_CLOPS
binding-protein-dependent transporter inner membrane protein
Binding-protein-dependent transport systems inner membrane component domain protein {ECO:0000313|EMBL:EDT28089.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_3_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20785..21912
DNA (1128bp) protein (376aa)
Multiple sugar-binding transport ATP-binding protein MsmK n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCV1_CLOPF
Multiple sugar-binding transport ATP-binding protein MsmK {ECO:0000313|EMBL:EDT28327.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
msmK; sugar ABC transporter ATP-binding protein
L3_129_030G1_scaffold_3_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21969..23324
DNA (1356bp) protein (452aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUH5_CLOPS
sucrose-6-phosphate hydrolase e1
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:ABG85348.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_129_030G1_scaffold_3_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23400..24344
DNA (945bp) protein (315aa)
fructokinase (EC:2.7.1.4)
Fructokinase {ECO:0000313|EMBL:ABG87501.1}; EC=2.7.1.4 {ECO:0000313|EMBL:ABG87501.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Fructokinase n=2 Tax=Clostridium perfringens RepID=Q0SUH4_CLOPS
L3_129_030G1_scaffold_3_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24505..24738)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SUH3_CLOPS
hypothetical protein
Adenylate cyclase {ECO:0000313|EMBL:EDT28318.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_3_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24811..25767
DNA (957bp) protein (319aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens F262 RepID=H7CUF1_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EIA17673.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lipoprotein
L3_129_030G1_scaffold_3_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25922..26311
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSA8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85785.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_129_030G1_scaffold_3_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26312..27001
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQB5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16173.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_3_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27250..28203
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUH0_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85314.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_129_030G1_scaffold_3_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28265..28831
DNA (567bp) protein (189aa)
Crispr-associated protein Cas4 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9N8_CLOPF
CRISPR-associated Cas4 family protein
Crispr-associated protein Cas4 {ECO:0000313|EMBL:EDT23058.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 490 in total

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