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L3_129_030G1_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_51_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85..519)
DNA (435bp) protein (145aa)
RNA polymerase sigma-K factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET3_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigK; sporulation sigma factor SigK
L3_129_030G1_scaffold_51_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(784..2454)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H433_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98221.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cell division protein FtsI/penicillin-binding protein 2
L3_129_030G1_scaffold_51_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2461..3078)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H374_9CLOT
L3_129_030G1_scaffold_51_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3100..4335)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98223.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase U32
L3_129_030G1_scaffold_51_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4340..4984)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98224.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
O-methyltransferase family protein
L3_129_030G1_scaffold_51_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5033..6040)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98225.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
aminodeoxychorismate lyase
L3_129_030G1_scaffold_51_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6137..7963)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA/BipA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H435_9CLOT
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EEH98226.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
typA; GTP-binding protein TypA/BipA
L3_129_030G1_scaffold_51_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8115..9782)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H376_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98227.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RNA-metabolising metallo-beta-lactamase family protein
L3_129_030G1_scaffold_51_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9858..10334)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98228.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fur; ferric uptake regulation protein Fur
L3_129_030G1_scaffold_51_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10377..10652)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98229.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
protein of unknown function DUF1292
L3_129_030G1_scaffold_51_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10732..11148)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU1_9CLOT
Holliday junction resolvase-like protein
L3_129_030G1_scaffold_51_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11196..11453)
DNA (258bp) protein (86aa)
UPF0297 protein A500_05071 n=2 Tax=Clostridium RepID=R9CDD7_9CLOT
UPF0297 protein A500_05071 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_129_030G1_scaffold_51_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11613..14252)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H378_9CLOT
L3_129_030G1_scaffold_51_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14553..15584)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7R4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98233.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
permease
L3_129_030G1_scaffold_51_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15578..16060)
DNA (483bp) protein (161aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98234.2}; Flags: Fragment;; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PRC-barrel domain protein
L3_129_030G1_scaffold_51_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16146..17228)
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase mnmA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU2_9CLOT
L3_129_030G1_scaffold_51_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17237..17668)
DNA (432bp) protein (144aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H439_9CLOT
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EEH98236.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
nifU; FeS cluster assembly scaffold protein NifU
L3_129_030G1_scaffold_51_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17652..18851)
DNA (1200bp) protein (400aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iscS1; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H380_9CLOT
L3_129_030G1_scaffold_51_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18854..19306)
DNA (453bp) protein (151aa)
Rrf2 family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7R7_9CLOT
Rrf2 family protein {ECO:0000313|EMBL:EEH98238.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cymR; HTH-type transcriptional regulator CymR
L3_129_030G1_scaffold_51_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19409..20650)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98239.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
recombination factor protein RarA
L3_129_030G1_scaffold_51_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20678..21160)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98240.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_030G1_scaffold_51_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21308..23932)
DNA (2625bp) protein (875aa)
bifunctional acetaldehyde-CoA/alcohol dehydrogenase (EC:1.1.1.1 1.2.1.10)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H441_9CLOT
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_030G1_scaffold_51_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24721..25134)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H382_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98242.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hutP family protein
L3_129_030G1_scaffold_51_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25237..25749)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98243.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
marR family protein
L3_129_030G1_scaffold_51_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25813..26529)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98244.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
MgtC/SapB transporter
L3_129_030G1_scaffold_51_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26689..28686)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98245.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
methyl-accepting chemotaxis protein
L3_129_030G1_scaffold_51_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28906..29310)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H443_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98246.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_030G1_scaffold_51_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29552..29920
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H384_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98247.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_129_030G1_scaffold_51_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30063..31331
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98248.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
FAD dependent oxidoreductase family protein
L3_129_030G1_scaffold_51_30
unknown

Not on your lists

31424..31564
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying items 1-30 of 172 in total

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