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L3_129_030G1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_156_1
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTP1_9FIRM
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:CCX98273.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_129_030G1_scaffold_156_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77..3034)
DNA (2958bp) protein (986aa)
Cna protein B-type domain./Gram positive anchor n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E006_9FIRM
Cna protein B-type domain./Gram positive anchor.
Cna protein B-type domain./Gram positive anchor {ECO:0000313|EMBL:CBK91177.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_129_030G1_scaffold_156_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3126..4010)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98260.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_129_030G1_scaffold_156_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4150..4350)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B6FKB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83525.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_129_030G1_scaffold_156_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4329..4775)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FKB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83524.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_129_030G1_scaffold_156_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4787..5749)
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FBX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98257.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
plasmid segregation actin-type ATPase ParM
L3_129_030G1_scaffold_156_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5759..6013)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FKB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73523.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_129_030G1_scaffold_156_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6000..6149)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7C5U4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92357.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_030G1_scaffold_156_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6684..6983)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6C3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73525.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_129_030G1_scaffold_156_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6976..7449)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C601_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73526.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_129_030G1_scaffold_156_11
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7459..7686)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z371_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72661.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_129_030G1_scaffold_156_12
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7930..9531)
DNA (1602bp) protein (534aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Lysine--tRNA ligase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z372_EUBE2
lysyl-tRNA synthetase, class II
L3_129_030G1_scaffold_156_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9555..10031)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB11_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
transcription elongation factor GreA
L3_129_030G1_scaffold_156_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10121..11083)
DNA (963bp) protein (321aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7A4_9FIRM
hypothetical protein
L3_129_030G1_scaffold_156_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11107..11445)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N980_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09270.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_030G1_scaffold_156_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11432..12547)
DNA (1116bp) protein (372aa)
Biotin-[acetyl-CoA-carboxylase] ligase / BirA family transcriptional regulator biotin operon repressor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9M8_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
BirA family transcriptional regulator
L3_129_030G1_scaffold_156_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12569..12853)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09272.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_030G1_scaffold_156_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12900..13892)
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Ornithine carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB14_9FIRM
ornithine carbamoyltransferase
L3_129_030G1_scaffold_156_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14172..15179)
DNA (1008bp) protein (336aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7A9_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF09274.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
N-acetylmuramoyl-L-alanine amidase
L3_129_030G1_scaffold_156_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15417..16211)
DNA (795bp) protein (265aa)
RNA methyltransferase TrmH family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N984_9FIRM
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDF09275.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
TrmH family RNA methyltransferase
L3_129_030G1_scaffold_156_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16233..17207)
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
6-phosphofructokinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9N2_9FIRM
6-phosphofructokinase
L3_129_030G1_scaffold_156_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17418..20954)
DNA (3537bp) protein (1179aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA polymerase III subunit alpha n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAZ7_9FIRM
dnaE; DNA polymerase III DnaE
L3_129_030G1_scaffold_156_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21163..22467)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09278.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
TRAP dicarboxylate transporter, DctM subunit
L3_129_030G1_scaffold_156_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22510..22983)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09279.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
C4-dicarboxylate transporter, small permease component
L3_129_030G1_scaffold_156_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22985..23995)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N988_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09280.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
TRAP dicarboxylate transporter, DctP subunit
L3_129_030G1_scaffold_156_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24033..24500)
DNA (468bp) protein (156aa)
Protein YiaL n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9N5_9FIRM
Protein YiaL {ECO:0000313|EMBL:CDF09281.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
uncharacterized protein, YhcH/YjgK/YiaL family
L3_129_030G1_scaffold_156_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24556..25482)
DNA (927bp) protein (309aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB00_9FIRM
L3_129_030G1_scaffold_156_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25740..26435)
DNA (696bp) protein (232aa)
Putative cyclase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB22_9FIRM
Putative cyclase {ECO:0000313|EMBL:CDF09283.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_129_030G1_scaffold_156_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26805..27572
DNA (768bp) protein (256aa)
AzlC protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7B5_9FIRM
AzlC protein {ECO:0000313|EMBL:CDF09284.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_129_030G1_scaffold_156_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27609..27935
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N991_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09285.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Branched-chain amino acid transport protein (AzlD).
Displaying items 1-30 of 94 in total

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