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L3_129_030G1_scaffold_170

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_170_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1051
DNA (1050bp) protein (350aa)
Transglutaminase-like superfamily protein n=102 Tax=Clostridium difficile RepID=T3G6M6_CLODC
conserved hypothetical protein
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:EQG74407.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_129_030G1_scaffold_170_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1166..2140)
DNA (975bp) protein (325aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=T3NZH5_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL31289.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
putative membrane protein
L3_129_030G1_scaffold_170_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2597..3478
DNA (882bp) protein (294aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
pepI; Proline iminopeptidase (Proline aminopeptidase)(PIP), peptidase S33 family (EC:3.4.11.5)
Proline iminopeptidase n=10 Tax=Clostridium difficile RepID=G6BAV1_CLODI
L3_129_030G1_scaffold_170_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3860..4663
DNA (804bp) protein (268aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6BAV2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27450.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_129_030G1_scaffold_170_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4675..5805
DNA (1131bp) protein (377aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BAV3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27451.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
putative ATPase
L3_129_030G1_scaffold_170_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5809..7218
DNA (1410bp) protein (470aa)
von Willebrand factor type A domain protein n=25 Tax=Clostridium difficile RepID=T2TCX3_CLODI
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EQG74181.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
uncharacterised protein
L3_129_030G1_scaffold_170_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7435..7938
DNA (504bp) protein (168aa)
Transcriptional regulator, CarD family n=1 Tax=Clostridium difficile CD002 RepID=U3W5E5_CLODI
Transcriptional regulator, CarD family {ECO:0000313|EMBL:CCL23416.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
regulatory protein
L3_129_030G1_scaffold_170_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9799..11154
DNA (1356bp) protein (452aa)
Amino acid/peptide transporter n=6 Tax=Clostridium difficile RepID=G6BAV6_CLODI
Amino acid/peptide transporter {ECO:0000313|EMBL:EHJ27454.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
proton-dependent oligopeptide transporter
L3_129_030G1_scaffold_170_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11381..12262)
DNA (882bp) protein (294aa)
Phenazine biosynthesis protein, PhzF family n=6 Tax=Clostridium difficile RepID=G6BAV7_CLODI
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:EHJ27455.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_129_030G1_scaffold_170_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12255..13001)
DNA (747bp) protein (249aa)
Sugar-specific transcriptional regulator, TrmB family n=6 Tax=Clostridium difficile RepID=G6BAV8_CLODI
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EHJ27456.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
sugar-specific transcriptional regulator
L3_129_030G1_scaffold_170_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13267..13584
DNA (318bp) protein (106aa)
Thioredoxin n=166 Tax=Clostridium difficile RepID=C9XQ75_CLODC
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_129_030G1_scaffold_170_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13790..15064)
DNA (1275bp) protein (425aa)
Aminotransferase class-V family protein n=10 Tax=Clostridium difficile RepID=T2T9U5_CLODI
Aminotransferase class-V family protein {ECO:0000313|EMBL:EQG74294.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
aminotransferase
L3_129_030G1_scaffold_170_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15951..16787
DNA (837bp) protein (279aa)
PRD domain protein n=6 Tax=Clostridium difficile RepID=T3F256_CLODI
Putative transcription antiterminator LicT {ECO:0000313|EMBL:EHJ27459.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Transcription antiterminator, PTS operonregulator
L3_129_030G1_scaffold_170_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17140..18717
DNA (1578bp) protein (526aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQG74345.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQG74345.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
PTS system, glucose-like IIB component domain protein n=8 Tax=Clostridium difficile RepID=T2TAW5_CLODI
malX; PTS system maltose and glucose-specific transporter subunit IIBC
L3_129_030G1_scaffold_170_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18710..19894
DNA (1185bp) protein (395aa)
C-S lyase family protein n=7 Tax=Clostridium difficile RepID=T3F4P2_CLODI
Putative maltose regulon modulator MalY {ECO:0000313|EMBL:EHJ27367.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
malY; bifunctional protein repressor/cystathionine beta-lyase
L3_129_030G1_scaffold_170_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19912..20511
DNA (600bp) protein (200aa)
Phosphosugar isomerase {ECO:0000313|EMBL:CKG86103.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CKG86103.1};; Putative phosphosugar isomerase {ECO:0000313|EMBL:CDS94412.1}; Sugar isomerase, KpsF/GutQ family {ECO:0000313|EMBL:CDS89455.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Sugar isomerase, KpsF/GutQ family n=183 Tax=Clostridium difficile RepID=G6BFZ8_CLODI
phosphosugar isomerase
L3_129_030G1_scaffold_170_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20535..21005
DNA (471bp) protein (157aa)
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EQG74521.1}; EC=2.7.1.- {ECO:0000313|EMBL:EQG74521.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glucose-specific phosphotransferase enzyme IIA component n=9 Tax=Clostridium difficile RepID=T2T9V0_CLODI
PTS system, glucose-like IIA component
L3_129_030G1_scaffold_170_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21363..22109
DNA (747bp) protein (249aa)
Bacterial regulatory s, luxR family protein n=10 Tax=Clostridium difficile RepID=T2TA12_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQG74373.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L3_129_030G1_scaffold_170_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22170..22844
DNA (675bp) protein (225aa)
4Fe-4S binding domain protein n=10 Tax=Clostridium difficile RepID=T2TAX0_CLODI
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQG74200.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
iron-sulfur-binding protein
L3_129_030G1_scaffold_170_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23214..24560
DNA (1347bp) protein (449aa)
Pectate lyase superfamily protein n=8 Tax=Clostridium difficile RepID=T2TCY5_CLODI
Pectate lyase superfamily protein {ECO:0000313|EMBL:EQG74511.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L3_129_030G1_scaffold_170_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24587..25987
DNA (1401bp) protein (467aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6BAX0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27374.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_129_030G1_scaffold_170_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26197..27633
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD002 RepID=U3W5C8_CLODI
Pectate lyase superfamily protein {ECO:0000313|EMBL:EQI77602.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
conserved hypothetical protein
L3_129_030G1_scaffold_170_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27862..28794
DNA (933bp) protein (311aa)
Putative transporter n=1 Tax=Clostridium difficile CD002 RepID=U3W1N7_CLODI
transporter
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EHJ31885.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_129_030G1_scaffold_170_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28899..29366
DNA (468bp) protein (156aa)
Uncharacterized protein n=20 Tax=Clostridium difficile RepID=C9XQ38_CLODC
hypothetical protein
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:EQG74254.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_129_030G1_scaffold_170_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29610..30482)
DNA (873bp) protein (291aa)
Sugar transport family protein n=9 Tax=Clostridium difficile RepID=T3P3G9_CLODI
Putative glucose uptake protein GlcU {ECO:0000313|EMBL:EHJ27378.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
sugar uptake protein
L3_129_030G1_scaffold_170_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30630..32594
DNA (1965bp) protein (655aa)
Bacterial regulatory s, luxR family protein n=10 Tax=Clostridium difficile RepID=T2TA15_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI77650.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
transcription antiterminator
L3_129_030G1_scaffold_170_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32594..33055
DNA (462bp) protein (154aa)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:EQI77649.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQI77649.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
PTS system, IIa component n=23 Tax=Clostridium difficile RepID=C9XQ35_CLODC
PTS system transporter subunit IIA
L3_129_030G1_scaffold_170_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33058..33378
DNA (321bp) protein (107aa)
PTS system, mannose-specfic IIB component {ECO:0000313|EMBL:CCK95503.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCK95503.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
PTS system, Fru family, IIB component domain protein n=208 Tax=Clostridium difficile RepID=C9XQ34_CLODC
PTS system transporter subunit IIB
L3_129_030G1_scaffold_170_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33394..34494
DNA (1101bp) protein (367aa)
PTS system, IIc component n=203 Tax=Clostridium difficile RepID=C9XQ33_CLODC
PTS system, IIc component
PTS system, Fru family, IIC component domain protein {ECO:0000313|EMBL:EQG74298.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_129_030G1_scaffold_170_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34614..37214
DNA (2601bp) protein (867aa)
putative alpha-mannosidase (EC:3.2.1.24)
Alpha mannosidase, middle domain protein n=9 Tax=Clostridium difficile RepID=T2T9V9_CLODI
Alpha mannosidase, middle domain protein {ECO:0000313|EMBL:EQG74594.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Displaying items 1-30 of 76 in total

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