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L3_129_030G1_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_310_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(896..1108)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19843.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_129_030G1_scaffold_310_2
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1634..2377
DNA (744bp) protein (248aa)
CRISPR-associated Cas family protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EYJ4_CLOTA
cas6; CRISPR-associated Cas family protein
CRISPR-associated Cas family protein {ECO:0000313|EMBL:CDI49499.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_129_030G1_scaffold_310_3
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2392..3741
DNA (1350bp) protein (450aa)
CRISPR-associated Csx8 family protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXS0_CLOTA
CRISPR-associated Csx8 family protein
CRISPR-associated Csx8 family protein {ECO:0000313|EMBL:CDI49498.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_129_030G1_scaffold_310_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3756..4655
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26385.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_129_030G1_scaffold_310_5
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4679..5761
DNA (1083bp) protein (361aa)
CRISPR-associated protein, Cas5t family n=1 Tax=Clostridium tetani 12124569 RepID=U6EVQ9_CLOTA
CRISPR-associated protein, Cas5t family
CRISPR-associated protein, Cas5t family {ECO:0000313|EMBL:CDI49496.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_129_030G1_scaffold_310_6
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5808..8087
DNA (2280bp) protein (760aa)
ATP-dependent RNA helicase n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ72_CLOTA
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDI49495.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
ATP-dependent RNA helicase
L3_129_030G1_scaffold_310_7
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8133..8627
DNA (495bp) protein (165aa)
Conserved protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q895W9_CLOTE
hypothetical protein
Conserved protein {ECO:0000313|EMBL:AAO35721.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
L3_129_030G1_scaffold_310_8
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8642..9634
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium tetani 12124569 RepID=U6EXR5_CLOTA
maturase-related protein
L3_129_030G1_scaffold_310_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9648..9926
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBL2_9CLOT
CRISPR-associated Cas2 family protein
L3_129_030G1_scaffold_310_10
unknown

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comp(10677..10850)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_129_030G1_scaffold_310_11
unknown

Not on your lists

comp(11297..11509)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_129_030G1_scaffold_310_12
unknown

Not on your lists

comp(11759..11905)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_129_030G1_scaffold_310_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13921..14577
DNA (657bp) protein (219aa)
queC; 7-cyano-7-deazaguanine synthase (EC:6.3.4.20)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9Z8_9CLOT
L3_129_030G1_scaffold_310_14
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14701..15126
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RGC7_9FUSO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK67896.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
hypothetical protein
L3_129_030G1_scaffold_310_15
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

15128..16585
DNA (1458bp) protein (486aa)
MATE efflux family protein n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2SZI8_9FUSO
MATE efflux family protein {ECO:0000313|EMBL:ERK67897.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
MatE family transporter
L3_129_030G1_scaffold_310_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16660..17310)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27385.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_310_17
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17605..19101
DNA (1497bp) protein (499aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:ADL53327.1}; EC=3.2.1.37 {ECO:0000313|EMBL:ADL53327.1};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Xylan 1,4-beta-xylosidase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWP5_CLOC7
L3_129_030G1_scaffold_310_18
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

19720..20514
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M3R5_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
L3_129_030G1_scaffold_310_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20601..21794
DNA (1194bp) protein (398aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG22_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26913.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transporter major facilitator family
L3_129_030G1_scaffold_310_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21993..22583
DNA (591bp) protein (197aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFY5_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26914.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transporter major facilitator family
L3_129_030G1_scaffold_310_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22686..23330
DNA (645bp) protein (215aa)
Putative osmoprotectant ABC transporter,substrate-binding/permease protein n=1 Tax=Clostridium botulinum B str. Eklund 17B(NRP) RepID=U4P7P8_CLOBO
Putative osmoprotectant ABC transporter,substrate-binding/permease protein {ECO:0000313|EMBL:CDH90337.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
osmoprotectant ABC transporter substrate-binding/permease
L3_129_030G1_scaffold_310_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23333..24229
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3T2_9CLOT
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL09577.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
glycine betaine transport system permease
L3_129_030G1_scaffold_310_23
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24252..24995
DNA (744bp) protein (248aa)
glycine betaine/carnitine/choline transport ATP-binding protein (EC:3.6.3.25)
glycine/betaine ABC transporter ATP-binding protein n=1 Tax=Clostridium botulinum RepID=UPI0002E7C8E4
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ87749.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
L3_129_030G1_scaffold_310_24
unknown

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25059..25394
DNA (336bp) protein (112aa)

This feature has no annotations

L3_129_030G1_scaffold_310_25
unknown

Not on your lists

comp(25313..25480)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_129_030G1_scaffold_310_26
unknown

Not on your lists

comp(25484..25576)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_129_030G1_scaffold_310_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26242..26352)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28452.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_310_28
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26577..27530
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GA68_9FIRM
L3_129_030G1_scaffold_310_29
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27640..28647)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037EE80E
Sodium:proton exchanger {ECO:0000313|EMBL:KHS58688.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
putative K+-dependent Na+/Ca+ exchanger-like protein
L3_129_030G1_scaffold_310_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28930..29727)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26911.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
TcdC protein
Displaying items 1-30 of 50 in total

View Taxonomy